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Specimen Data Sequences Combined
  Record Details For MLFPI019-09     Back to Search: Records
  IDENTIFIERS:
  Sample ID: MLFPI9 Museum ID:
  Field ID: MLFPI9 Collection Code:
  Deposited In: Instituto de Investigacao das Pescas e do Mar
 

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  TAXONOMY:
  Phylum: Chordata Subfamily: Trachinotinae
  Class: Actinopterygii Genus: Trachinotus
  Order: Carangiformes Species: Trachinotus ovatus
  Family: Carangidae Subspecies:
  BIN (Cluster ID): BOLD:AAD2425
  * Barcode Index Numbers(BIN): cluster barcode sequences to create OTUs that closely reflect species groupings
  SPECIMEN DETAILS:
  Voucher Status: Reproduction:
  Tissue Descriptor: Sex:
  Brief Note: Grade A, 16-01-2012, ML: FAO-27 Life Stage: A
  Detailed Notes: sample donor and identifier: Miguel Carneiro, mcarneir@ipimar.pt
 
  COLLECTION DATA:
  Country: Portugal Date Collected: 2007-11-12
  Province/State: Collectors: IPIMAR
  Region/County:    
  Sector:    
  Exact Site:    
  Latitude: 36.72 Elevation:
  Longitude: -6.59 Elv. Accuracy:
  Coord. Source: Depth:
  Coord. Accuracy: Depth Accuracy :
 
  PUBLICATIONS:
  Landi, Monica; Dimech, Mark; Arculeo, Marco; Biondo, Girolama; Martins, Rogelia; Carneiro, Miguel; Carvalho, Gary Robert; Brutto, Sabrina Lo; Costa, Filipe O. DNA Barcoding for Species Assignment: The Case of Mediterranean Marine Fishes. PLoS ONE 2014-09-16;9(9):e106135 (PDF)
 
 

  SEQUENCE: COI-5P   [Funding Source: N/A]
  Sequence ID: MLFPI019-09.COI-5P GenBank Accession: KJ768314
  Last Updated: 2024-09-24 Genome: Mitochondrial
  Locus: Cytochrome Oxidase Subunit 1 5' Region
  Nucleotides: 652 bp
 
TTTATCTAGTATTTGGTGCTTGAGCCGGAATAGTAGGTACAGCTTTAAGCCTACTCATTCGAGCAGAGCTTAGCC
AACCCGGCGCCCTCCTAGGAGATGACCAAATTTATAATGTAATCGTTACGGCCCATGCTTTCGTAATGATTTTCT
TTATAGTAATACCAATTATGATTGGAGGCTTTGGAAACTGACTTATTCCTCTAATGATCGGAGCCCCTGATATAG
CATTCCCTCGAATGAACAATATGAGCTTCTGACTTCTACCCCCTTCTTTCCTACTTCTTCTCGCTTCCTCAGGAG
TAGAAGCAGGTGCCGGAACCGGATGAACAGTCTACCCTCCCCTAGCTGGAAACCTTGCTCATGCGGGAGCATCTG
TTGATTTAACCATCTTCTCTCTCCACTTAGCTGGAATTTCCTCAATTCTTGGGGCAATTAACTTTATTACAACAG
TAATTAACATGAAACCTCATGCCGTTTCCATGTACCAAATTCCACTATTCGTTTGAGCTGTACTAATTACAGCTG
TTCTCCTTCTTCTCTCACTTCCCGTCCTAGCTGCAGGCATTACAATGCTCCTTACGGACCGGAACTTAAATACCG
CCTTCTTTGACCCAGCCGGAGGAGGAGACCCCTCCTCTATCAACACCTTCTG
  Amino Acids:  
 
YLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMA
FPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTV
INMKPHAVSMYQIPLFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTAFFDPAGGGDPSSINTFX
  Illustrative Barcode:
 
   

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  ELECTROPHEROGRAM TRACE FILES: COI-5P
  Length Pcr Primers Seq Primer Read Status Run Date  
165 C_FishF1t1 / C_FishR1t1
M13F
Forward high qual 2009-11-27  
481 C_FishF1t1 / C_FishR1t1
M13F
Reverse med qual 2009-11-27  
 
Generated using the BOLD API

													
  Specimen Images:
  License:
Unspecified (default): All Rights Reserved 
  License Holder:
Unspecified

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Collection Site:

  Attribution:
Specimen Depository: Instituto de Investigacao das Pescas e do Mar
Sequencing Center:
Photography:
Collectors: IPIMAR
Specimen Identification: Rogelia Martins
Project Manager: Monica Landi
Sequencing Support: