Public Data Portal - Specimen Record

Looking for the latest datasets? Visit boldsystems.org.

 
 
 
 
 
Specimen Data Sequences Combined
  Record Details For ELMSA187-17     Back to Search: Records
  IDENTIFIERS:
  Sample ID: IBSAS-FZ0222 Museum ID: IBSAS-FZ0222
  Field ID: FZ0222 Collection Code:
  Deposited In: Slovak Academy of Sciences, Plant Science and Biodiversity Centre
 

Comments

Add a Comment

No Comment made
More...

Tags

No tags
Edit
  TAXONOMY:
  Phylum: Arthropoda Subfamily: Elminae
  Class: Insecta Genus: Onychelmis
  Order: Coleoptera Species: Onychelmis lobata
  Family: Elmidae Subspecies:
  BIN (Cluster ID): BOLD:ADB9579
  * Barcode Index Numbers(BIN): cluster barcode sequences to create OTUs that closely reflect species groupings
  SPECIMEN DETAILS:
  Voucher Status: Vouchered:Registered Collection Reproduction: S
  Tissue Descriptor: whole specimen Sex: M
  Brief Note: Life Stage: imago
  Detailed Notes:
 
  COLLECTION DATA:
  Country: Ecuador Date Collected: 2013-08-17
  Province/State: Collectors: Fedor Ciampor, Zuzana Ciamporova-Zatovicova
  Region/County: Napo    
  Sector: Cascada    
  Exact Site: Cascada    
  Latitude: -0.728 Elevation: 1129 Meters
  Longitude: -77.766 Elv. Accuracy:
  Coord. Source: Depth:
  Coord. Accuracy: Depth Accuracy :
 
  PUBLICATIONS:
  Marek Linský, Zuzana Čiamporová-Zaťovičová & Fedor Čiampor Jr A revision of Onychelmis Hinton, 1941 (Coleoptera: Elmidae), with description of new species, DNA barcoding and notes on the geography of the genus European Journal of Taxonomy 2021-03-11;739(1):1-35 (PDF)
 
 

  SEQUENCE: COI-5P   [Funding Source: N/A]
  Sequence ID: ELMSA187-17.COI-5P GenBank Accession: MF322607
  Last Updated: 2024-09-24 Genome: Mitochondrial
  Locus: Cytochrome Oxidase Subunit 1 5' Region
  Nucleotides: 620 bp
 
ACTTTGTACTTCATTTTAGGATCATGATCTGGAATACTAGGTATGGCATTAAGATTATTAATTCGTGCAGAACTT
GGAACTCCAGGAGCCCTAATTGGAGATGACCAAATTTATAACGTTATTGTAACCGCTCATGCTTTTGTAATAATT
TTTTTCATAGTTATACCAATTATAATTGGTGGTTTTGGAAATTGATTAGTCCCCCTAATATTAGGAGCCCCTGAT
ATAGCATTTCCCCGAATAAACAACATAAGGTTTTGACTTTTACCCCCCTCTTTAACCCTTCTCTTAATAAGAAGA
GTAGTTGAAAGAGGAGTCGGAACTGGATGAACAGTTTATCCCCCCTTATCAGCAAATATTGCTCATAGAGGATCA
TCTGTTGATTTGGCAATTTTTAGTCTTCATTTAGCCGGAATTTCATCAATCTTAGGAGCTGTAAATTTTATCACA
ACAGTAATTAATATACGATCTCCAGGAATAACTTTCGATCGTATACCTTTATTTGTTTGATCAGTAGCAATTACT
GCTTTATTACTTTTATTATCTCTTCCAGTTTTAGCTGGAGCTATTACTATGCTACTAACAGATCGAAATTTGAAT
ACTTCATTTTTTGACCCAGC
  Amino Acids:  
 
TLYFILGSWSGMLGMALSLLIRAELGTPGALIGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMLGAPD
MAFPRMNNMSFWLLPPSLTLLLMSSVVESGVGTGWTVYPPLSANIAHSGSSVDLAIFSLHLAGISSILGAVNFIT
TVINMRSPGMTFDRMPLFVWSVAITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPX
  Illustrative Barcode:
 
   

Comments

Add a Comment

No Comment made
More...

Tags

No tags
Edit
  ELECTROPHEROGRAM TRACE FILES: COI-5P
  Length Pcr Primers Seq Primer Read Status Run Date  
611 LCO1490 / HCO2198
LCO1490
Forward high qual 2017-01-28  
587 LCO1490 / HCO2198
HCO2198
Reverse high qual 2017-01-28  
 
Generated using the BOLD API

													
  Specimen Images:
  License:
CreativeCommons Attribution Non-Commercial Share-Alike (2020)
  License Holder:
Fedor Ciampor jr, Slovak Academy of Sciences, Plant Science and Biodiversity Centre

Comments

Add a Comment

No Comment made
More...

Tags

No tags
Edit

Collection Site:

  Attribution:
Specimen Depository: Slovak Academy of Sciences, Plant Science and Biodiversity Centre
Sequencing Center:
Photography: Fedor Ciampor jr, Slovak Academy of Sciences, Plant Science and Biodiversity Centre
Collectors: Fedor Ciampor, Zuzana Ciamporova-Zatovicova
Specimen Identification: Fedor Ciampor jr
Project Manager: Fedor Ciampor jr
Sequencing Support: