The Public Data Portal supports queries based on taxonomy(scientific names only), geography, attribution fields (i.e. collectors and taxonomists), specimen depositories, project or dataset codes, specimen and sequence identifiers (sampleids, museumids, processed, etc). Free text searches are allowed, the system will try to extract meaningful terms from the search. Search terms should be separated by a space, search terms containing more than one word ("United States" or "Mus musculus") should be wrapped in quotes.
Search examples (Searches are case insensitive):
Culicidae: will return all the mosquitoes in the database
Mammalia Aves: will return all the mammals and birds in the database. Using two terms under the same context (taxonomic in this case), returns all records that match either term.
Aves Peru: will return all the birds collected in Peru. Using two terms under a different context (taxonomic and geographic), returns records that only match both terms.
Hawaii -Chordata: will return all non-chordates, or invertebrates, collected in Hawaii. It is often necessary to exclude records based on a search criteria and is accomplished by adding a minus sign immediately in front of the search term.
"Biodiversity Institute of Ontario" Lepidoptera Florida: will return all moths and butterflies in the Biodiversity Institute of Ontario collection that were collected in Florida. Complex queries are possible by combining multiple search terms.
Search Guidelines:
No spaces in terms when using a multiterm seach (correct: "United States" Mammalia)
Negative symbol (-) is an exclusion operator which must be preceded by a space
If the same term appears in multiple contexts (i.e. "Florida" appears in both the geography list and in "University of Florida"). When using a free text search for the state Florida, employ the context clarification '[geo]' (eg Florida[geo]). Other context clarification tags are [tax], [ids], [inst], [researcher].
Reza Zahiri, J. Donald Lafontaine, B. Christian Schmidt, Jeremy R. deWaard, Evgeny V. Zakharov, Paul D. N. Hebert Probing planetary biodiversity with DNA barcodes: The Noctuoidea of North America PLoS ONE 2017-06-01;12(6):0-0 (PDF)
TREE RECONSTRUCTION OF BIN & NEAREST NEIGHBOR:
HAPLOTYPE NETWORK:
Color & Label Scheme:
COLLECTION LOCATION:
Countries:
Costa Rica - [106]
Ecuador - [2]
French Guiana - [5]
Honduras - [1]
Peru - [3]
Puerto Rico - [1]
United States - [4]
Panama - [1]
Martinique - [1]
Colombia - [1]
DATA MANAGERS:
Public Data:
Private Data:
CBG Collections Unit - [6] John James Wilson - [30] Mehrdad Hajibabaei - [37] Suresh Naik - [31] Axel Hausmann - [5] Carlos Lopez-Vaamonde - [3] James B. Sullivan - [1] Jeremy deWaard - [3] Scott E. Miller - [2] Charles S Walker - [2] Rodolphe Rougerie - [3] Yves Basset - [1] CBG Project Management Team - [2]
Canadian National Collection of Insects, Arachnids and Nematodes - [3]
Centre for Biodiversity Genomics - [8]
Institut National de la Recherche Agronomique, Zoologie Forestiere - [1]
Instituto de Investigacion de Recursos Biologicos Alexander von Humboldt - [1]
Landesmuseum Kaernten - [3]
Mined from GenBank, NCBI - [2]
Museum national d'Histoire naturelle - [1]
Personal Collection of Jean-Papaul Delvalee - [1]
Research Collection of D. H. Janzen & W. Hallwachs - [9]
Research Collection of J. B. Sullivan - [1]
SNSB, Zoologische Staatssammlung Muenchen - [5]
Smithsonian Institution, National Museum of Natural History - [2]
Smithsonian Tropical Research Institute - [1]
University of Pennsylvania - [47]
Sequencing Centers:
Centre for Biodiversity Genomics - [101]
Photography:
CBG Photography Group - [5] CBG Robotic Rig - [4] Christian Wieser - [1] Daniel H. Janzen - [120] Dr. Axel Hausmann - [3] ForestGEO Arthropods - [2] James Sullivan - [1] Jerome Barbut - [1] MY Chen - [1] Mary Parra B - [1] Megan Swan - [1] Nicolas Moulin - [1] ZSM Photography Team - [1]
Collectors:
A.Cavosie - [1] Anabelle Cordoba - [1] Barbut J. & Poirier E. - [1] Biomonitores - [1] Bobadilla - [1] Calixto Moraga - [1] Carlos Lopez-Vaamonde - [1] Carolina Cano - [4] Christian Wieser - [1] Cirilo Umana - [1] D.A.Currutt - [2] D.Janzen - [8] Daniel H. Janzen - [1] E. Diller - [1] E. Wierig - [1] E.-G. Burmeister - [1] Elda Araya - [3] F.Quesada - [10] F.Quesada&H.Cambronero - [1] F.Quesada&R.Franco - [3] F.Quesada&S.Rios - [3] Freddy Quesada - [1] Gloria Sihezar - [2] H. Sulak & O. Vasha - [1] H.Cambronero&R.Franco - [5] H.Cambronero&S.Rios - [5] I.Chacon - [2] J. Troubridge - [2] J.-P. Delvalee - [1] J.B.Sullivan - [1] Jose Alberto Sanchez - [1] Jose Perez - [3] Jose Solis Leiva - [1] Lopez - [1] Lucia Rios - [1] M. Dietl - [1] Mariano Pereira - [1] Minor Carmona - [2] Perez - [1] Petrona Rios - [6] R. Beck - [1] R. Zuniga - [2] R.Franco - [10] R.Franco & F.Quesada - [2] R.Franco&H.Cambronero - [2] R.Franco&S.Rios - [2] Ramirez - [1] Roster Moraga - [2] S. Stroud - [1] S.Rios - [1] S.Rios & H.Cambronero - [1] S.Rios&F.Quesada - [3] S.Rios&H.Cambronero - [7] S.Rios&R.Franco - [7] S.Stroud - [1] W.Hallwachs - [8]
Specimen Identification:
Angela Telfer - [2] Axel Hausmann - [4] CBG Taxonomy Unit - [1] Christian Schmidt - [1] Daniel H. Janzen - [75] Delvalee Jean paul - [1] Eric H. Metzler - [2] Gottfried Behounek - [1] Hajo Gernaat - [1] J. Donald Lafontaine - [2] James B. Sullivan - [1] Jerome Barbut - [1] Kate Perez - [2] Mary L Parra - [1] Renee Miskie - [1] Rodolphe Rougerie - [3] Yacksecari Lopez - [1]