The Public Data Portal supports queries based on taxonomy(scientific names only), geography, attribution fields (i.e. collectors and taxonomists), specimen depositories, project or dataset codes, specimen and sequence identifiers (sampleids, museumids, processed, etc). Free text searches are allowed, the system will try to extract meaningful terms from the search. Search terms should be separated by a space, search terms containing more than one word ("United States" or "Mus musculus") should be wrapped in quotes.
Search examples (Searches are case insensitive):
Culicidae: will return all the mosquitoes in the database
Mammalia Aves: will return all the mammals and birds in the database. Using two terms under the same context (taxonomic in this case), returns all records that match either term.
Aves Peru: will return all the birds collected in Peru. Using two terms under a different context (taxonomic and geographic), returns records that only match both terms.
Hawaii -Chordata: will return all non-chordates, or invertebrates, collected in Hawaii. It is often necessary to exclude records based on a search criteria and is accomplished by adding a minus sign immediately in front of the search term.
"Biodiversity Institute of Ontario" Lepidoptera Florida: will return all moths and butterflies in the Biodiversity Institute of Ontario collection that were collected in Florida. Complex queries are possible by combining multiple search terms.
Search Guidelines:
No spaces in terms when using a multiterm seach (correct: "United States" Mammalia)
Negative symbol (-) is an exclusion operator which must be preceded by a space
If the same term appears in multiple contexts (i.e. "Florida" appears in both the geography list and in "University of Florida"). When using a free text search for the state Florida, employ the context clarification '[geo]' (eg Florida[geo]). Other context clarification tags are [tax], [ids], [inst], [researcher].
Paul D. N. Hebert , Sujeevan Ratnasingham , Evgeny V. Zakharov , Angela C. Telfer , Valerie Levesque-Beaudin , Megan A. Milton , Stephanie Pedersen , Paul Jannetta and Jeremy R. deWaard Counting animal species with DNA barcodes: Canadian insects Philosophical transactions of the royal society b 2016-09-05;371(1702):0-0 (PDF)
Jeremy R. deWaard, Valerie Levesque-Beaudin, Stephanie L. deWaard, Natalia V. Ivanova, Jaclyn T.A. McKeown, Renee Miskie, Suresh Naik, Kate H.J. Perez, Sujeevan Ratnasingham, Crystal N. Sobel, Jayme E. Sones, Claudia Steinke, Angela C. Telfer, Andrew D. Young, Monica R. Young, Evgeny V. Zakharov, and Paul D.N. Hebert Expedited assessment of terrestrial arthropod diversity by coupling Malaise traps with DNA barcoding. Genome 2018-09-26 (PDF)
Kathrin F. Stanger-Hall, James E. Lloyd and David M. Hillis Phylogeny of North American fireflies (Coleoptera: Lampyridae): implications for the evolution of light signals. Molecular Phylogenetics and Evolution 2007-10-01;45(1):33-49 (PDF)
Jingchan Hu, Mikko Pentinsaariβ, Paul D.N. Hebert Measuring mass: variation among 3,161 species of Canadian Coleoptera and the prospects of a mass registry for all insects PeerJ 2022-01-21;1(1):12 (PDF)
TREE RECONSTRUCTION OF BIN & NEAREST NEIGHBOR:
HAPLOTYPE NETWORK:
Color & Label Scheme:
COLLECTION LOCATION:
Countries:
Canada - [58]
United States - [73]
Unrecoverable - [2]
DATA MANAGERS:
Public Data:
Private Data:
CBG Project Management Team - [61] Beverly Mcclenaghan - [1] Charles S Walker - [23] Alex Smith - [1] Patrice Bouchard - [3] Chris J Verdone - [22]
CBG Collections Unit - [2] CBG Project Management Team - [11] Candace Fallon - [26] Charles S Walker - [3] Chris J Verdone - [4]
BIN COMPLIANT WITH METADATA REQUIREMENTS
Specimen Images:
GMFRH276-15 {Photuris}
License:
CreativeCommons Attribution (2016)
License Holder:
CBG Photography Group, Centre for Biodiversity Genomics
Canadian National Collection of Insects, Arachnids and Nematodes - [3]
Centre for Biodiversity Genomics - [72]
Clemson University, Arthropod Collection - [15]
Colorado State University, C. P. Gillette Museum of Arthropod Diversity - [26]
Mined from GenBank, NCBI - [26]
Museum of Southwestern Biology - [4]
Research Collection of Beverly Mcclenaghan - [1]
Smithsonian Institution, National Museum of Natural History - [2]
The Xerces Society for Invertebrate Conservation - [2]
University of Guelph - [1]
Sequencing Centers:
Centre for Biodiversity Genomics - [121]
Photography:
Alison Forde - [3] Anna Walker - [8] C. Verdone - [26] CBG Photography Group - [16] CBG Robotic Rig - [2] Candace Fallon - [12] Jaclyn McCormick - [6] Kristen Mancuso - [4] Lauren Seymour - [1] Morgan Roblin - [1] Richard Joyce - [35]
Collectors:
A.Borisenko - [2] Anna Walker - [4] Anna Yellin - [1] B. McClenaghan - [1] B.F.Carr - [3] BIO Collections - [7] BIObus 2010 - [2] BIObus 2013 - [2] BIObus 2014 - [1] BioBus 2011 - [7] Biobus 2010 - [3] Biobus 2011 - [4] Brenden Bertrand - [1] C. Vandermeer - [1] C. Warne - [1] C.Carr - [1] C.Sobel - [1] C.Vandermeer - [1] CBG Collections Staff - [6] Elizabeth Biro - [1] Gergin Blagoev - [1] Heidi Brown - [1] J.Cossey - [3] J.E.Cossey - [5] J.L.Carr - [3] J.R.Straka - [5] J.Sones - [1] J.Straka - [1] James Sones - [3] K.Perez - [2] Kristina J. Anderson - [3] L. Buschman - [5] L.Wallace - [1] M. Mcphee - [1] M. Roblin - [1] M.Brown - [15] MA Smith - [1] Mike Ferro - [4] Mikko Pentinsaari - [1] Miles Zhang - [2] N.Jeffery - [1] N.W.Jeffery - [5] Owen Martin - [5] Parks Canada Staff - [1] Paul Hebert - [1] Richard Joyce - [11] Rouge NUP BioBlitz Volunteers - [1] S. Espinola - [1] S. McCubbin - [1] S.McCubbin - [3] S.Miller - [1] Sharon Bewick - [1] T. Kubik - [21] T. Schmitt - [1] T.F.Mitterboeck - [1] Tyler Peters - [1] V.Junea - [1]
Specimen Identification:
Alex Smith - [1] Andrew B. T. Smith - [3] BOLD ID Engine - [2] BOLD Identification System [2017] - [16] BOLD Identification System [2018] - [1] BOLD Identification System [2019] - [1] BOLD Identification System [2020] - [1] BOLD Identification System [] - [34] Bold Sequence Classifier - [1] Mikko Pentinsaari - [1] Paul D.N. Hebert - [2] Renee Miskie - [6] Richard Joyce - [11] T. Kubik - [26]