The Public Data Portal supports queries based on taxonomy(scientific names only), geography, attribution fields (i.e. collectors and taxonomists), specimen depositories, project or dataset codes, specimen and sequence identifiers (sampleids, museumids, processed, etc). Free text searches are allowed, the system will try to extract meaningful terms from the search. Search terms should be separated by a space, search terms containing more than one word ("United States" or "Mus musculus") should be wrapped in quotes.
Search examples (Searches are case insensitive):
Culicidae: will return all the mosquitoes in the database
Mammalia Aves: will return all the mammals and birds in the database. Using two terms under the same context (taxonomic in this case), returns all records that match either term.
Aves Peru: will return all the birds collected in Peru. Using two terms under a different context (taxonomic and geographic), returns records that only match both terms.
Hawaii -Chordata: will return all non-chordates, or invertebrates, collected in Hawaii. It is often necessary to exclude records based on a search criteria and is accomplished by adding a minus sign immediately in front of the search term.
"Biodiversity Institute of Ontario" Lepidoptera Florida: will return all moths and butterflies in the Biodiversity Institute of Ontario collection that were collected in Florida. Complex queries are possible by combining multiple search terms.
Search Guidelines:
No spaces in terms when using a multiterm seach (correct: "United States" Mammalia)
Negative symbol (-) is an exclusion operator which must be preceded by a space
If the same term appears in multiple contexts (i.e. "Florida" appears in both the geography list and in "University of Florida"). When using a free text search for the state Florida, employ the context clarification '[geo]' (eg Florida[geo]). Other context clarification tags are [tax], [ids], [inst], [researcher].
Paul D. N. Hebert , Sujeevan Ratnasingham , Evgeny V. Zakharov , Angela C. Telfer , Valerie Levesque-Beaudin , Megan A. Milton , Stephanie Pedersen , Paul Jannetta and Jeremy R. deWaard Counting animal species with DNA barcodes: Canadian insects Philosophical transactions of the royal society b 2016-09-05;371(1702):0-0 (PDF)
TREE RECONSTRUCTION OF BIN & NEAREST NEIGHBOR:
HAPLOTYPE NETWORK:
Color & Label Scheme:
COLLECTION LOCATION:
Countries:
Canada - [425]
United States - [37]
DATA MANAGERS:
Public Data:
Private Data:
Will R Kuhn - [2] Ana Montero - [10] Kenneth H Stead - [1] CBG Project Management Team - [313] Jean-Francois Landry - [34] CBG Collections Unit - [2] Beverly Mcclenaghan - [1] Jeremy deWaard - [60] John Brown - [4] Chris Looney - [2] Daniel Handfield - [2] Carlo Seifert - [5] Gregory R. Pohl - [1] Scott E. Miller - [4] John James Wilson - [1]
Mark Mckone - [1] CBG Project Management Team - [2] Daniel Handfield - [15] Reza Zahiri - [1] Jeremy deWaard - [1]
BIN COMPLIANT WITH METADATA REQUIREMENTS
Specimen Images:
RDLQE807-06 {Pseudexentera spoliana}
License:
CreativeCommons Attribution (2010)
License Holder:
CBG Photography Group, Centre for Biodiversity Genomics
Biology Centre of the Czech Academy of Sciences, Institute of Entomology - [5]
Canadian Food Inspection Agency - [1]
Canadian Forest Service, Northern Forestry Centre - [4]
Canadian National Collection of Insects, Arachnids and Nematodes - [54]
Centre for Biodiversity Genomics - [316]
Great Smoky Mountains National Park - [2]
Research Collection of Beverly Mcclenaghan - [1]
Research Collection of Daniel Handfield - [44]
Research Collection of G. Pohl - [1]
Research Collection of John Brown - [5]
Research Collection of Mark McKone - [1]
Research Collection of Vazrick Nazari - [1]
Smithsonian Institution, National Museum of Natural History - [15]
University of Guelph, School of Environmental Sciences, Nigel Raine Lab - [10]
Washington State Department of Agriculture - [2]
Sequencing Centers:
Centre for Biodiversity Genomics - [344]
Photography:
CBG Photography Group - [183] CBG Robotic Imager - [2] Carlo L. Seifert - [5] Daniel Handfield - [15] Gregory R. Pohl - [1] Jean-Francois Landry - [18] Mark J. Dreiling - [2] Paola Pierossa - [1] RJ Smith, Emerie Landers, Laura Dixson - [5] Stephanie Kirk - [4] Vazrick Nazari - [1]
Collectors:
A. W. Thomas - [30] Aimee Breton - [2] Amy Murray - [2] Ana Montero-Castano - [10] Anne Parkhill - [1] B. McClenaghan - [1] B.C. Schmidt - [1] BIO Collections Staff - [2] BIOBus 2012 - [2] BIObus 2013 - [11] C.D. Bird - [6] CBG Collections Staff - [89] CFIA - [1] Catherine Wassmansdorf - [1] Charley S. Eiseman - [1] Chris Johnstone - [1] Chris Roth - [1] D.Handfield - [2] D.J.Wright - [2] Daniel Handfield - [27] David Holden - [1] Derrick Muntwyler - [1] Dylan Gordon - [1] Eric LAGASA - [1] Evan Perry - [12] G.R. Pohl - [2] G.R.Pohl - [1] Gergin Blagoev - [2] Greg Meredith - [3] Greg Staines - [2] GregMeredith - [1] Handfield D. - [15] Hannah Kendrick - [2] Heather Eckert - [5] J Adams - [2] J Glaser - [4] J. B. Sullivan & L Deutschman - [1] J. Brown - [2] J. Glaser - [1] J.Adams - [2] J.F. Landry - [14] J.F.G.Clarke - [1] J.P.Walas - [5] JF Landry - [4] Jean-Francois Landry - [13] Jeff Johnson - [2] Jeramie Jenkins - [1] Jeremiah Garber - [6] Josh Ellis - [1] Josh Palumbo - [1] K.Greenham - [1] K.H.Stead - [1] Kevin D`Souza - [1] Kristina J. Anderson - [1] L Scott - [1] L. Scott - [7] L.Attard - [1] Leah Baratta - [1] Lorrie Goos - [1] Mark Dreiling - [2] Megan Scott - [1] Melissa Randle - [1] Melody Donald - [1] Meridith White - [8] Michael Cottrill - [1] Michael Graham - [1] Nathalie Morin - [4] Nich Seebach - [1] P.D.N. Hebert - [1] Park Staff - [18] Patrick Martens - [1] Paul Hebert - [68] Paul Super et al - [1] Peter Tarleton - [1] Philip Sax - [4] Pohl G.R. - [1] S.Gerrow - [4] S.Miller - [1] Sandy Speakman - [1] Shannon McLeod - [3] Sheldon Hiebert - [1] Sue Bender - [4] Tim Currie - [1] Tyler Schaefer - [1] V. Nazari - [1] V.A.Brou - [1] Victoria Currie - [1] Will Kuhn - [2] Zach Turner - [1]
Specimen Identification:
Anthony W. Thomas - [30] BOLD ID Engine - [29] BOLD Identification System [2016] - [1] BOLD Identification System [2017] - [90] BOLD Identification System [2019] - [2] BOLD Identification System [] - [81] BOLD Machine Learning Tool Kit - [12] Daniel Handfield - [44] Eric H Lagasa - [2] Gergin A. Blagoev - [2] Gregory R. Pohl - [4] Jean-Francois Landry - [17] Jeremy deWaard - [1] John Brown - [1] John W. Brown - [3] Paul D.N. Hebert - [62] Renee Miskie - [2] Reza Zahiri - [1] USNM Curators - [4] Vazrick Nazari - [1]