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Specimen Data Sequences Combined
  Record Details For UAMIC016-12     Back to Search: Records
  IDENTIFIERS:
  Sample ID: UAM:Ento:117597 Museum ID: UAM Insects 117597
  Field ID: Collection Code:
  Deposited In: University of Alaska Museum
 

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  TAXONOMY:
  Phylum: Arthropoda Subfamily: Nebriinae
  Class: Insecta Genus: Nebria
  Order: Coleoptera Species: Nebria metallica
  Family: Carabidae Subspecies:
  BIN (Cluster ID): BOLD:ACB0017
  * Barcode Index Numbers(BIN): cluster barcode sequences to create OTUs that closely reflect species groupings
  SPECIMEN DETAILS:
  Voucher Status: Vouchered:Registered Collection Reproduction: S
  Tissue Descriptor: leg Sex:
  Brief Note: Life Stage: A
  Detailed Notes:
 
  COLLECTION DATA:
  Country: United States Date Collected: 2009-07-10
  Province/State: Alaska Collectors: Derek S. Sikes
  Region/County:    
  Sector:    
  Exact Site: Chowiet Is.    
  Latitude: 56.036 Elevation: 6 Meters
  Longitude: -156.74 Elv. Accuracy:
  Coord. Source: Garmin GPS unit Depth:
  Coord. Accuracy: 154 Meters Depth Accuracy :
 
  PUBLICATIONS:
  Sikes, D.S., M. Bowser, J. M. Morton, C. Bickford, S. Meierotto, K. Hildebrandt. Building a DNA barcode library of Alaska’s non-marine arthropods Genome 2016-10-21;60(3):248-259 (PDF)
 
 

  SEQUENCE: COI-5P   [Funding Source: iBOL:WG1.5]
  Sequence ID: UAMIC016-12.COI-5P GenBank Accession: KU875540
  Last Updated: 2024-09-24 Genome: Mitochondrial
  Locus: Cytochrome Oxidase Subunit 1 5' Region
  Nucleotides: 658 bp
 
AACTTTATATTTTATCTTTGGTGCTTGATCAGGAATAGTTGGAACTTCATTAAGAATATTAATTCGAGCAGAATT
AGGTAATCCTGGATCTTTAATCGGTGATGATCAAATTTATAATGTTATTGTAACAGCTCATGCATTTGTAATAAT
TTTTTTTATAGTTATACCTATTATAATTGGAGGATTTGGAAATTGATTAGTTCCTTTAATATTAGGAGCTCCTGA
TATAGCATTCCCTCGAATAAACAATATAAGATTTTGACTTTTACCTCCTTCTTTAACTCTTCTTTTAATAAGCTC
TATAGTAGAAAGAGGAGCTGGTACTGGATGAACAGTATACCCCCCTCTATCATCTGGAATTGCTCATAGAGGAGC
ATCTGTAGATTTAGCTATCTTTAGTTTACATTTAGCAGGAGTATCTTCAATCCTAGGAGCAGTAAATTTTATTAC
TACAATTATTAATATACGATCAATTGGTATATCATTTGATCGAATACCATTATTTGTATGATCAGTCGGAATTAC
AGCATTATTACTTCTTCTTTCTTTACCTGTATTAGCAGGAGCTATTACTATACTTTTAACTGATCGAAACTTAAA
TACATCTTTTTTTGACCCTGCGGGAGGAGGAGATCCTATTTTATACCAACATTTATTT
  Amino Acids:  
 
TLYFIFGAWSGMVGTSLSMLIRAELGNPGSLIGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMLGAPD
MAFPRMNNMSFWLLPPSLTLLLMSSMVESGAGTGWTVYPPLSSGIAHSGASVDLAIFSLHLAGVSSILGAVNFIT
TIINMRSIGMSFDRMPLFVWSVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLF
  Illustrative Barcode:
 
   

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  ELECTROPHEROGRAM TRACE FILES: COI-5P
  Length Pcr Primers Seq Primer Read Status Run Date  
620 C_LepFolF / C_LepFolR
C_LepFolF
Forward high qual 2012-11-02  
632 C_LepFolF / C_LepFolR
C_LepFolR
Reverse high qual 2012-11-02  
 
Generated using the BOLD API

													
  Specimen Images:
  License:
CreativeCommons - Attribution Non-Commercial No Derivatives (2012)
  License Holder:
Derek Sikes, University of Alaska Museum

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Collection Site:

  Attribution:
Specimen Depository: University of Alaska Museum
Sequencing Center:
Photography: Casey Bickford, University of Alaska Museum
Collectors: Derek S. Sikes
Specimen Identification: Derek S. Sikes
Project Manager: Derek S. Sikes
Sequencing Support: International Barcode of Life (WG1.5)