Public Data Portal - Specimen Record

 
 
 
 
 
Specimen Data Sequences Combined
  Record Details For TCHDC013-17     Back to Search: Records
  IDENTIFIERS:
  Sample ID: 120166 Museum ID: AL-111
  Field ID: HDHB-564-11 Collection Code:
  Deposited In: The Himalaya Drug Company
 

Comments

Add a Comment

No Comment made
More...

Tags

No tags
Edit
  TAXONOMY:
  Phylum: Magnoliophyta Subfamily:
  Class: Magnoliopsida Genus: Terminalia
  Order: Myrtales Species: Terminalia chebula
  Family: Combretaceae Subspecies:
  BIN (Cluster ID):
  * Barcode Index Numbers(BIN): cluster barcode sequences to create OTUs that closely reflect species groupings
  SPECIMEN DETAILS:
  Voucher Status: Specimen deposited in Herbarium Reproduction: S
  Tissue Descriptor: Aerial dried plant Sex: H
  Brief Note: Life Stage:
  Detailed Notes:
 
  COLLECTION DATA:
  Country: India Date Collected: 2012-12-28
  Province/State: Karnataka Collectors: Kannan R
  Region/County: Bangalore North    
  Sector: Nelamangala    
  Exact Site: Kannamangala    
  Latitude: Elevation: 882 Meters
  Longitude: Elv. Accuracy:
  Coord. Source: Depth:
  Coord. Accuracy: Depth Accuracy :
 
 

  SEQUENCE: ITS   [Funding Source: N/A]
  Sequence ID: TCHDC013-17.ITS GenBank Accession: MF409657
  Last Updated: 2023-01-24 Genome: Nuclear
  Locus: Internal Transcribed Spacer 1 and 2
  Nucleotides: 483 bp
 
GNNNGNNCATCCTGNCTGAGGTCACGTCGGTTAACGTTTAGGGTCGTCGGCTGGGGACGGATGCGGCCGCCACGG
GCACTGTTTCTGGGGCTCGGATCGACCACCGAATGCCGTGGCGCTTTGCTTCCCCAGCGCGTATTTGGGCCATCC
GTGGCTCGTGGTCACGGGAGGCCAGCTTCCGCTTCCGGACCACCTCCCATCGCTCGAGGGGTGGAGGGTATGGAG
GCAACGCGATGCGTGACACCCAGGCAGACGTGCCCTCAGCCGAGGCTTCGGGCGCAACTTGCGTTCAAAGACTCG
ATGGTTCACGGGATTCTGCAATTCACACCAGNTATCGCATATCCCCCCCGTGGAGAGAANNCCCCCCNCACGNAG
NGGAAAAACACACCCCATATTTTGATAGAGCGCCCTTAACATAATTAAATATTTATATATTAATATAAAAATATT
ATTCAAAAANAAAAAAATATATAAGGGAGGAAA
  Amino Acids:  
 
  Illustrative Barcode:
 
   

Comments

Add a Comment

No Comment made
More...

Tags

No tags
Edit
  ELECTROPHEROGRAM TRACE FILES: ITS
  Length Pcr Primers Seq Primer Read Status Run Date  
263 PMF1 / ITS4
Forward high qual 2017-06-15  
292 PMF1 / ITS4
Reverse med qual 2017-06-15  
 

  SEQUENCE: rbcLa   [Funding Source: N/A]
  Sequence ID: TCHDC013-17.rbcLa GenBank Accession: MK244681
  Last Updated: 2023-01-24 Genome: Chloroplast
  Locus:
  Nucleotides: 546 bp
 
ATTATAAACTGACTTATTATACTCCTGACTATCAAACCAAAGATACTGATATCTTGGCAGCATTCCGAGTAACTC
CTCAACCTGGAGTTCCGCCTGAGGAAGCAGGGGCTGCAGTGGCTGCTGAATCTTCTACTGGGACATGGACAACTG
TATGGACCGATGGGCTTACCAGCCTTGACCGTTATAAAGGAAGATGCTACCACATCGAACCTGTTGCTGGAGAAG
AAAATCAATATATATGCTATGTAGCTTACCCCTTAGACCTTTTTGAAGAAGGTTCTGTTACTAATATGTTTACTT
CCATTGTGGGTAATGTATTTGGGTTCAAAGCCCTACGCGCTCTACGTCTGGAAGATCTGCGAATTCCTACGGCCT
ATATTAAAACTTTCCAAGGCCCTCCTCACGGGATCCAAGTTGAGAGAGATAAATTGAACAAGTATGGTCGTCCCC
TATTGGGATGTACTATTAAACCTAAATTGGGGTTATCCGCTAAGAACTACGGTAGAGCAGTTTATGAATGTCTTC
GCGGTGGATTTGATTTTTACA
  Amino Acids:  
 
YKLTYYTPDYQTKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEPVAGEE
NQYICYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPTAYIKTFQGPPHGIQVERDKLNKYGRPL
LGCTIKPKLGLSAKNYGRAVYECLRGGFDFYX
  Illustrative Barcode:
 
   

Comments

Add a Comment

No Comment made
More...

Tags

No tags
Edit
  ELECTROPHEROGRAM TRACE FILES: rbcLa
  Length Pcr Primers Seq Primer Read Status Run Date  
516 rbcLa-F / rbcLa-F
Forward high qual 2017-06-15  
520 rbcLa-F / rbcLa-F
Reverse high qual 2017-06-15  
 
Generated using the BOLD API

													
  Specimen Images:
  License:
Copyright (2013)
  License Holder:
R&D Center, The Himalaya Drug Company

Comments

Add a Comment

No Comment made
More...

Tags

No tags
Edit

Collection Site: N/A
  Attribution:
Specimen Depository: The Himalaya Drug Company
Sequencing Center:
Photography: Kannan R, The Himalaya Drug Company
Collectors: Kannan R
Specimen Identification:
Project Manager: Gururaj Chalageri
Sequencing Support: