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Specimen Data Sequences Combined
  Record Details For TCHDC004-17     Back to Search: Records
  IDENTIFIERS:
  Sample ID: 120161 Museum ID: Al-15
  Field ID: HDHB-592-11 Collection Code:
  Deposited In: The Himalaya Drug Company
 

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  TAXONOMY:
  Phylum: Magnoliophyta Subfamily:
  Class: Magnoliopsida Genus: Withania
  Order: Solanales Species: Withania somnifera
  Family: Solanaceae Subspecies:
  BIN (Cluster ID):
  * Barcode Index Numbers(BIN): cluster barcode sequences to create OTUs that closely reflect species groupings
  SPECIMEN DETAILS:
  Voucher Status: Specimen deposited in Herbarium Reproduction: S
  Tissue Descriptor: aerial dried plant Sex: H
  Brief Note: Life Stage:
  Detailed Notes:
 
  COLLECTION DATA:
  Country: India Date Collected: 2011-08-03
  Province/State: Karnataka Collectors: Kannan R
  Region/County: Makali    
  Sector: Bangalore    
  Exact Site:    
  Latitude: Elevation: 882 Meters
  Longitude: Elv. Accuracy:
  Coord. Source: Depth:
  Coord. Accuracy: Depth Accuracy :
 
 

  SEQUENCE: ITS   [Funding Source: N/A]
  Sequence ID: TCHDC004-17.ITS GenBank Accession: MF409658
  Last Updated: 2020-02-17 Genome: Nuclear
  Locus: Internal Transcribed Spacer 1 and 2
  Nucleotides: 356 bp
 
GTGCGCTGTGATGCTGACTGGGGTCGCGGTCGGAGCGCGCAGGCGCTGTAAGGGTCCCGGAGACCGCAGCGCGAC
GGGCAGGGGCGCGGCACCACGAGAGTTGAGTTTCAACCACCACTTGCCGCGACGTCCGTCGACGTGGACTCGCAT
TTAGGCCAGCCGCGAGCTCTAGGCGCACGGGAGGCCAGTATCCGTCCCGCGACGCCCCCTGCCGTTTCCACGGGA
GCGGGGCGAGGGGGGCGACGCGATGCGTGACGCCCAGGCGACTGCCCTCGGCCTAATGGCTTCGGGCGCAACTTG
CGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATGA
  Amino Acids:  
 
  Illustrative Barcode:
 
   

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  ELECTROPHEROGRAM TRACE FILES: ITS
  Length Pcr Primers Seq Primer Read Status Run Date  
305 PMF1 / ITS4
Forward low qual 2015-01-13  
316 PMF1 / ITS4
Reverse low qual 2015-01-13  
 

  SEQUENCE: rbcLa   [Funding Source: N/A]
  Sequence ID: TCHDC004-17.rbcLa GenBank Accession: MK244678
  Last Updated: 2020-02-17 Genome: Chloroplast
  Locus:
  Nucleotides: 382 bp
 
TTGACTTATTATACTCCTGAGTACCAAACCAAGGATACTGATATATTGGCAGCATTCCAAGTAACTCCTCAACCT
GGAGTTCCACCTGAAGAAGCAGGGGCCGCGGTAGCTGCCGAATCTTCTACTGGTACATGGACAACTGTATGGACC
GATGGACTTACCAGTCTTGATCGTTACAAAGGGCGATGCTACCGCATCGAGCGTGTTGTTGGAGAAAAAGATCAA
TTTATTGCTTATGTAGCTTACCCTTTAGACCTTTTTGAAGAAGGTTCCGTTACCAACATGTTTACTTCCATTGTA
GGTAATGTATTTGGGTTTAAAGCCCTGCGCGCTCTACGTCTGGAAGATCTGCGAATCCCCCCTGCTTATGTTAAA
ACTTTCC
  Amino Acids:  
 
LTYYTPEYQTKDTDILAAFQVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYRIERVVGEKDQ
FIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFX
  Illustrative Barcode:
 
   

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  ELECTROPHEROGRAM TRACE FILES: rbcLa
  Length Pcr Primers Seq Primer Read Status Run Date  
349 rbcLa-F / rbcLa-F
Forward med qual 2015-01-13  
439 rbcLa-F / rbcLa-F
Reverse low qual 2015-01-13  
 
Generated using the BOLD API

													
  Specimen Images:
  License:
Copyright (2011)
  License Holder:
R&D Center, The Himalaya Drug Company

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Collection Site: N/A
  Attribution:
Specimen Depository: The Himalaya Drug Company
Sequencing Center:
Photography: Kannan R, The Himalaya Drug Company
Collectors: Kannan R
Specimen Identification:
Project Manager: Gururaj Chalageri
Sequencing Support: