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Specimen Data Sequences Combined
  Record Details For SSBRC2008-14     Back to Search: Records
  IDENTIFIERS:
  Sample ID: BIOUG13475-C04 Museum ID: BIOUG13475-C04
  Field ID: L#13BIOBUS-0494 Collection Code:
  Deposited In: Centre for Biodiversity Genomics
 

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  TAXONOMY:
  Phylum: Arthropoda Subfamily:
  Class: Arachnida Genus: Haemaphysalis
  Order: Ixodida Species: Haemaphysalis leporispalustris
  Family: Ixodidae Subspecies:
  BIN (Cluster ID): BOLD:ACL3894
  * Barcode Index Numbers(BIN): cluster barcode sequences to create OTUs that closely reflect species groupings
  SPECIMEN DETAILS:
  Voucher Status: Vouchered:Registered Collection Reproduction:
  Tissue Descriptor: Whole Voucher Sex:
  Brief Note: Cape Breton Highlands NP Life Stage:
  Detailed Notes: June 29, trap partially collapsed
 
  COLLECTION DATA:
  Country: Canada Date Collected: 2013-06-29
  Province/State: Nova Scotia Collectors: BIObus 2013
  Region/County: Cape Breton Highlands National Park    
  Sector: Paquette Lake Rd.    
  Exact Site:    
  Latitude: 46.837 Elevation: 276 Meters
  Longitude: -60.434 Elv. Accuracy:
  Coord. Source: GPSmap 60Cx Depth:
  Coord. Accuracy: Depth Accuracy :
 
  PUBLICATIONS:
  Monica R Young, Heather C Proctor, Jeremy R deWaard, Paul DN Hebert DNA barcodes expose unexpected diversity in Canadian mites Molecular Ecology 2019-10-31;28(24):5347-5395 (PDF)
 
 

  SEQUENCE: COI-5P   [Funding Source: iBOL:WG1.4]
  Sequence ID: SSBRC2008-14.COI-5P GenBank Accession: MF810877
  Last Updated: 2024-06-13 Genome: Mitochondrial
  Locus: Cytochrome Oxidase Subunit 1 5' Region
  Nucleotides: 582 bp
 
TTAATTTTCGGAACGTGAGCAGGAATACTAGGATTAAGAATAAGAATTTTAATTCGAATAGAATTAGGGCAACCA
GGAACTCTAATTGGAAACGACCAAATTTATAATGTAATTGTAACTGCTCATGCATTTATTATAATTTTTTTTATA
GTTATACCTATTATAATTGGTGGATTTGGAAACTGATTAGTTCCTATAATATTAGGGGCTCCAGACATAGCTTTT
CCTCGAATAAACAACATAAGATTTTGATTATTACCCCCTTCTTTATTCTTACTTATTAATTCTTCCTTAGTAGAA
AGAGGAGCAGGGACTGGATGAACGGTTTATCCTCCCCTATCCTCTAATTTATCTCACTATGGCCCGTCAGTAGAT
ATAGCAATTTTTTCATTACATTTAGCTGGAGCTTCATCTATTTTAGGAGCTATCAATTTTATTACAACTATTATC
AATATACGATCTTTAGGAATAACCTTAGAGCGAATACCCCTATTTGTTTGATCTGTTTTAATTACAGCAATTTTA
CTTCTTCTGTCACTCCCAGTGTTAGCTGGCGCAATTACTATATTATTAACAGATCGA
  Amino Acids:  
 
LIFGTWAGMLGLSMSILIRMELGQPGTLIGNDQIYNVIVTAHAFIMIFFMVMPIMIGGFGNWLVPMMLGAPDMAF
PRMNNMSFWLLPPSLFLLINSSLVESGAGTGWTVYPPLSSNLSHYGPSVDMAIFSLHLAGASSILGAINFITTII
NMRSLGMTLERMPLFVWSVLITAILLLLSLPVLAGAITMLLTDR
  Illustrative Barcode:
 
   

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  ELECTROPHEROGRAM TRACE FILES: COI-5P
  Length Pcr Primers Seq Primer Read Status Run Date  
626 C_LepFolF / C_LepFolR
C_LepFolR
Reverse high qual 2014-07-23  
 
Generated using the BOLD API

													
  Specimen Images:
  License:
CreativeCommons - Attribution (2016)
  License Holder:
CBG Photography Group, Centre for Biodiversity Genomics

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Collection Site:

  Attribution:
Specimen Depository: Centre for Biodiversity Genomics
Sequencing Center:
Photography: CBG Photography Group, Centre for Biodiversity Genomics
Collectors: BIObus 2013
Specimen Identification: Allison Brown
Project Manager: CBG Project Management Team
Sequencing Support: International Barcode of Life (WG1.4)