Public Data Portal - Specimen Record

Looking for the latest datasets? Visit boldsystems.org.

 
 
 
 
 
Specimen Data Sequences Combined
  Record Details For SMTPI4197-14     Back to Search: Records
  IDENTIFIERS:
  Sample ID: BIOUG16067-B01 Museum ID: BIOUG16067-B01
  Field ID: GMP#05725 Collection Code:
  Deposited In: Centre for Biodiversity Genomics
 

Comments

Add a Comment

No Comment made
More...

Tags

No tags
Edit
  TAXONOMY:
  Phylum: Arthropoda Subfamily: Azeliinae
  Class: Insecta Genus: Azelia
  Order: Diptera Species: Azelia cilipes
  Family: Muscidae Subspecies:
  BIN (Cluster ID): BOLD:AAG1780
  * Barcode Index Numbers(BIN): cluster barcode sequences to create OTUs that closely reflect species groupings
  SPECIMEN DETAILS:
  Voucher Status: Vouchered:Registered Collection Reproduction:
  Tissue Descriptor: Sex:
  Brief Note: Brantford, Brantford CIVS Life Stage:
  Detailed Notes:
 
  COLLECTION DATA:
  Country: Canada Date Collected: 2014-10-03
  Province/State: Ontario Collectors: Brenda Csordas
  Region/County: Brantford    
  Sector: Brantford CIVS    
  Exact Site: EQP-CLL-580    
  Latitude: 43.143 Elevation: 217 Meters
  Longitude: -80.274 Elv. Accuracy:
  Coord. Source: Google Earth Depth:
  Coord. Accuracy: Depth Accuracy :
 
  PUBLICATIONS:
  Paul D. N. Hebert , Sujeevan Ratnasingham , Evgeny V. Zakharov , Angela C. Telfer , Valerie Levesque-Beaudin , Megan A. Milton , Stephanie Pedersen , Paul Jannetta and Jeremy R. deWaard Counting animal species with DNA barcodes: Canadian insects Philosophical transactions of the royal society b 2016-09-05;371(1702):0-0 (PDF)
 
 

  SEQUENCE: COI-5P   [Funding Source: iBOL:WG1.6]
  Sequence ID: SMTPI4197-14.COI-5P GenBank Accession: KR762164
  Last Updated: 2024-09-24 Genome: Mitochondrial
  Locus: Cytochrome Oxidase Subunit 1 5' Region
  Nucleotides: 549 bp
 
ACTTTATATTTTATTTTTGGAGCTTGATCCGGAATAGTAGGAACTTCTTTAAGTATTTTAATTCGAGCTGAATTA
GGTCATCCTGGAGCTTTAATTGGAGATGATCAAATTTATAATGTAATTGTTACAGCTCACGCTTTTATTATAATT
TTTTTTATAGTAATACCAATTATAATTGGAGGATTTGGTAATTGATTAATCCCTTTAATATTAGGAGCTCCTGAT
ATAGCTTTTCCACGAATAAATAATATAAGTTTTTGATTATTACCTCCTGCACTTACATTATTATTAATAAGAAGT
ATAACTGAAAACGGAACTGGTACAGGATGAACTGTTTACCCTCCCTTATCTTCTAATATTGCTCATGGAGGACCT
TCAGTTGATTTAGCTATTTTTTCTTTACATTTAGCTGGAATTTCTTCTATTTTAGGAGCTGTAAATTTTATTACA
ACAGTAATTAATATACGATCAACAGGAATTACATTTGATCGTATACCTTTATTTGTTTGATCAGTAGTAATTACA
GCATTATTACTTTTATTATCCTTA
  Amino Acids:  
 
TLYFIFGAWSGMVGTSLSILIRAELGHPGALIGDDQIYNVIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPD
MAFPRMNNMSFWLLPPALTLLLMSSMTENGTGTGWTVYPPLSSNIAHGGPSVDLAIFSLHLAGISSILGAVNFIT
TVINMRSTGITFDRMPLFVWSVVITALLLLLSL
  Illustrative Barcode:
 
   

Comments

Add a Comment

No Comment made
More...

Tags

No tags
Edit
  ELECTROPHEROGRAM TRACE FILES: COI-5P
  Length Pcr Primers Seq Primer Read Status Run Date  
625 C_LepFolF / C_LepFolR
C_LepFolR
Reverse high qual 2014-10-14  
 
Generated using the BOLD API

													
  Specimen Images: N/A
Collection Site:

  Attribution:
Specimen Depository: Centre for Biodiversity Genomics
Sequencing Center:
Photography:
Collectors: Brenda Csordas
Specimen Identification: Jade Savage
Project Manager: CBG Project Management Team
Sequencing Support: International Barcode of Life (WG1.6)