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Specimen Data Sequences Combined
  Record Details For SDP648014-17     Back to Search: Records
  IDENTIFIERS:
  Sample ID: 17_DHS_DBL_18 Museum ID:
  Field ID: 17_DHS_DBL_18 Collection Code:
  Deposited In: University of New England
 

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  TAXONOMY:
  Phylum: Chordata Subfamily: Rajinae
  Class: Elasmobranchii Genus: Leucoraja
  Order: Rajiformes Species: Leucoraja erinacea
  Family: Rajidae Subspecies:
  BIN (Cluster ID): BOLD:AAA5283
  * Barcode Index Numbers(BIN): cluster barcode sequences to create OTUs that closely reflect species groupings
  SPECIMEN DETAILS:
  Voucher Status: E-Vouchered:DNA/Tissue+Photo Reproduction:
  Tissue Descriptor: Sex:
  Brief Note: Skate Life Stage:
  Detailed Notes: ::meta:{"specimen":["Deborah Landry"],"trace_run_site":["Generic Commercial Lab"],"trace_upload":["Deborah Landry","Karen Shibles"],"sequencing_run_site":["Generic Commercial Lab"],"sequence_upload":["Nicole Dorier","Guillaume Rwendeye"],"image":["Nicole Dorier","Guillaume Rwendeye","Deborah Landry"]}::endMeta:
 
  COLLECTION DATA:
  Country: United States Date Collected: 2016-05-02
  Province/State: New Hampshire Collectors: Marine Sci Center
  Region/County: Seabrook    
  Sector:    
  Exact Site:    
  Latitude: 42.8976 Elevation:
  Longitude: -70.8184 Elv. Accuracy:
  Coord. Source: Depth:
  Coord. Accuracy: Depth Accuracy :
 
 

  SEQUENCE: COI-5P   [Funding Source: N/A]
  Sequence ID: SDP648014-17.COI-5P GenBank Accession: MG299080
  Last Updated: 2024-03-12 Genome: Mitochondrial
  Locus: Cytochrome Oxidase Subunit 1 5' Region
  Nucleotides: 652 bp
 
CCTCTACCTAATCTTTGGTGCCTGAGCAGGTATAGTCGGAACTGGCTTAAGTCTTTTAATTCGAGCAGAATTGAG
CCAGCCCGGATCACTTCTAGGTGATGATCAGATTTATAATGTCCTTGTTACAGCCCATGCCTTTGTAATAATCTT
TTTTATGGTTATACCAATTATAATCGGAGGGTTCGGCAATTGACTTGTCCCTTTAATGATTGGCTCTCCAGACAT
AGCCTTCCCACGCATAAATAATATGAGCTTTTGACTTTTACCACCCTCATTTCTTCTTCTCCTAGCCTCCGCTGG
AGTTGAAGCCGGGGCGGGAACAGGTTGAACTGTCTACCCCCCTCTAGCAGGCAATCTAGCCCACGCGGGGGCCTC
CGTAGACTTAACAATTTTCTCTCTCCATTTAGCAGGGATTTCTTCCATCCTGGCCTCCATTAACTTCATCACCAC
AATTATTAACATAAAACCCCCCGCAATCTCTCAATACCAAACACCTTTGTTCGTATGATCGATCCTTGTTACAAC
TGTCTTACTTCTTATGGCCCTCCCAGTTCTAGCAGCTGGCATTACCATACTTCTCACAGATCGTAACCTCAATAC
AACTTTCTTTGACCCAGCAGGAGGAGGGGACCCTATTCTTTACCAACACCTA
  Amino Acids:  
 
LYLIFGAWAGMVGTGLSLLIRAELSQPGSLLGDDQIYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGSPDM
AFPRMNNMSFWLLPPSFLLLLASAGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILASINFITT
IINMKPPAISQYQTPLFVWSILVTTVLLLMALPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHL
  Illustrative Barcode:
 
   

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  ELECTROPHEROGRAM TRACE FILES: COI-5P
  Length Pcr Primers Seq Primer Read Status Run Date  
584 C_FishF1t1 / C_FishR1t1
M13R
Reverse high qual 2017-05-30  
605 C_FishF1t1 / C_FishR1t1
M13F-20
Forward high qual 2017-05-30  
 
Generated using the BOLD API

													
  Specimen Images:
  License:
CreativeCommons - Attribution Share-Alike (2017)
  License Holder:
Unspecified, Deering High School

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Collection Site:

  Attribution:
Specimen Depository: University of New England
Sequencing Center:
Photography: Deborah Landry, Deering High School
Collectors: Marine Sci Center
Specimen Identification: Student
Project Manager: Student Portal Manager
Sequencing Support: