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Specimen Data Sequences Combined
  Record Details For SDP598020-17     Back to Search: Records
  IDENTIFIERS:
  Sample ID: 17_GHS_JSAB_06A Museum ID:
  Field ID: 17_GHS_JSAB_06A Collection Code:
  Deposited In: University of New England
 

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  TAXONOMY:
  Phylum: Chordata Subfamily: Pholinae
  Class: Actinopterygii Genus: Pholis
  Order: Scorpaeniformes Species: Pholis gunnellus
  Family: Pholidae Subspecies:
  BIN (Cluster ID):
  * Barcode Index Numbers(BIN): cluster barcode sequences to create OTUs that closely reflect species groupings
  SPECIMEN DETAILS:
  Voucher Status: E-Vouchered: DNA/Tissue + Photo Reproduction: S
  Tissue Descriptor: Sex:
  Brief Note: Rock Gunnel Life Stage:
  Detailed Notes: ::meta:{"specimen":["Allison Bunker"],"trace_run_site":["Generic Commercial Lab"],"trace_upload":["Deborah Landry","Josie Smith","Allison Bunker"],"image":["Josie Smith","Allison Bunker"],"sequencing_run_site":["Generic Commercial Lab"],"sequence_upload":["Allison Bunker","Josie Smith"]}::endMeta:
 
  COLLECTION DATA:
  Country: United States Date Collected: 2016-11-14
  Province/State: Maine Collectors: Debbie Landry
  Region/County: Casco Bay    
  Sector:    
  Exact Site: Little John Beach    
  Latitude: 43.7542 Elevation:
  Longitude: -70.1334 Elv. Accuracy:
  Coord. Source: Depth: 4 Meters
  Coord. Accuracy: 5 Meters Depth Accuracy :
 
 

  SEQUENCE: COI-5P   [Funding Source: N/A]
  Sequence ID: SDP598020-17.COI-5P GenBank Accession:
  Last Updated: 2017-10-16 Genome: Mitochondrial
  Locus: Cytochrome Oxidase Subunit 1 5' Region
  Nucleotides: 652 bp
 
CCTTTATCTAGTATTTGGTGCATGAGCCGGAATAGTAGGCACAGCTCTAAGCCTCCTCATTCGAGCAGAGTTAAG
CCAGCCCGGCGCCCTACTAGGCGACGACCAAATTTATAATGTAATTGTTACAGCACATGCATTCGTAATAATTTT
CTTTATAGTAATACCAATCATGATCGGGGGCTTCGGAAACTGACTCATCCCCTTAATGATTGGGGCCCCAGACAT
GGCGTTCCCCCGTATAAATAACATGAGTTTTTGGCTTCTTCCTCCTTCTTTCCTTCTTCTCCTTGCCTCTTCTGG
GGTTGAGGCGGGAGCTGGTACAGGGTGAACGGTATACCCGCCCCTTTCTGGTAATTTAGCGCACGCCGGGGCCTC
CGTTGATTTAACAATCTTTTCTCTTCATCTGGCGGGGATTTCTTCAATTCTTGGGGCAATTAACTTTATCACAAC
CATTATTAACATAAAACCTCCTGCCATTTCTCAGTATCAAACACCGCTCTTCGTTTGATCCGTACTTATTACCGC
CGTTCTTCTGCTCCTTTCCCTCCCCGTGCTAGCAGCCGGAATCACCATACTTCTGACAGATCGTAATCTTAACAC
TACCTTTTTTGATCCCGCAGGAGGGGGTGACCCAATTCTTTACCAACACTTA
  Amino Acids:  
 
LYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDM
AFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLSGNLAHAGASVDLTIFSLHLAGISSILGAINFITT
IINMKPPAISQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHL
  Illustrative Barcode:
 
   

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  ELECTROPHEROGRAM TRACE FILES: COI-5P
  Length Pcr Primers Seq Primer Read Status Run Date  
635 M13F-20 / M13R
M13R
Reverse high qual 2017-02-07  
627 M13F-20 / M13R
M13F-20
Forward high qual 2017-02-07  
 
Generated using the BOLD API

													
  Specimen Images:
  License:
CreativeCommons - Attribution Share-Alike (2017)
  License Holder:
Unspecified, Gorham High School

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Collection Site:

  Attribution:
Specimen Depository: University of New England
Sequencing Center:
Photography: Deborah Landry, Gorham High School
Collectors: Debbie Landry
Specimen Identification: Deborah Landry
Project Manager: Student Portal Manager
Sequencing Support: