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Specimen Data Sequences Combined
  Record Details For SDP598018-17     Back to Search: Records
  IDENTIFIERS:
  Sample ID: 17_GHS_KGMPKT_09A Museum ID:
  Field ID: 17_GHS_KGMPKT_09A Collection Code:
  Deposited In: University of New England
 

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  TAXONOMY:
  Phylum: Arthropoda Subfamily:
  Class: Malacostraca Genus: Orconectes
  Order: Decapoda Species: Orconectes virilis
  Family: Cambaridae Subspecies:
  BIN (Cluster ID):
  * Barcode Index Numbers(BIN): cluster barcode sequences to create OTUs that closely reflect species groupings
  SPECIMEN DETAILS:
  Voucher Status: E-Vouchered: DNA/Tissue + Photo Reproduction:
  Tissue Descriptor: Sex:
  Brief Note: crayfish Life Stage:
  Detailed Notes: ::meta:{"specimen":["Kate Gilbert","Keltan Tanguay","Megan Polchies"],"trace_run_site":["Generic Commercial Lab"],"trace_upload":["Deborah Landry","Aaron Landry"],"image":["Kate Gilbert","Megan Polchies","Keltan Tanguay","Aaron Landry"],"sequencing_run_site":["Generic Commercial Lab"],"sequence_upload":["Kate Gilbert","Keltan Tanguay","Megan Polchies"]}::endMeta:
 
  COLLECTION DATA:
  Country: United States Date Collected: 2016-11-06
  Province/State: Maine Collectors: Megan Polchies
  Region/County: Gorham    
  Sector:    
  Exact Site: Gravel, sand, leaves, shallow pools    
  Latitude: 43.6925 Elevation: 44 Meters
  Longitude: -70.4156 Elv. Accuracy:
  Coord. Source: Depth: 0.2 Meters
  Coord. Accuracy: Depth Accuracy :
 
 

  SEQUENCE: COI-5P   [Funding Source: N/A]
  Sequence ID: SDP598018-17.COI-5P GenBank Accession:
  Last Updated: 2017-10-16 Genome: Mitochondrial
  Locus: Cytochrome Oxidase Subunit 1 5' Region
  Nucleotides: 660 bp
 
GGAACATTATATTTTATTTTTGGTACTTGAGCTGGGATAGTAGGGACTTCATTAAGAATAATTATCCGAGTGGAG
TTAGGCCAGCCAGGAAGATTAATTGGGGACGATCAAATTTATAATGTGGTAGTTACAGCTCATGCTTTTGTAATA
ATTTTTTTTATAGTAATGCCTATTATGATTGGTGGTTTTGGGAATTGGTTAATTCCTTTAATGTTAGGGGCTCCT
GATATGGCTTTTCCTCGTATAAATAATATAAGGTTTTGATTACTTCCTTTCTCTTTAACTTTGTTGTTAACTAGA
GGAATAGTCGAAAGAGGAGTAGGTACAGGATGGACAGTGTACCCCCCTCTTGCTTCTGCAATTGCTCATGCAGGG
GCATCAGTAGATTTAGGTATTTTTTCGTTACATTTAGCAGGGGTGTCCTCTATTTTAGGATCAGTTAATTTTATA
ACAACGGCTATTAATATACGGGCTGCGGGGATAACTATGGATCGTATACCGTTATTTGTTTGGTCAGTGTTTATT
ACTACTGTATTATTATTACTATCTTTGCCCGTTTTGGCTGGAGCAATTACTATGTTATTAACTGATCGAAATTTG
AATACTTCTTTTTTCGATCCTGCAGGTGGCGGGGATCCTATTCTTTATCAGCATTTATTT
  Amino Acids:  
 
GTLYFIFGTWAGMVGTSLSMIIRVELGQPGSLIGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLIPLMLGAP
DMAFPRMNNMSFWLLPFSLTLLLTSGMVESGVGTGWTVYPPLASAIAHAGASVDLGIFSLHLAGVSSILGSVNFM
TTAINMRAAGMTMDRMPLFVWSVFITTVLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLF
  Illustrative Barcode:
 
   

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  ELECTROPHEROGRAM TRACE FILES: COI-5P
  Length Pcr Primers Seq Primer Read Status Run Date  
663 LCO1490 / HCO2198
M13F-20
Forward high qual 2017-02-07  
658 LCO1490 / HCO2198
M13R
Reverse high qual 2017-02-07  
 
Generated using the BOLD API

													
  Specimen Images:
  License:
CreativeCommons - Attribution Share-Alike (2017)
  License Holder:
Unspecified, Gorham High School

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  License:
CreativeCommons - Attribution Share-Alike (2017)
  License Holder:
Unspecified, Gorham High School

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Collection Site:

  Attribution:
Specimen Depository: University of New England
Sequencing Center:
Photography: Aaron Landry, Gorham High School
Collectors: Megan Polchies
Specimen Identification: Student
Project Manager: Student Portal Manager
Sequencing Support: