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Specimen Data Sequences Combined
  Record Details For SDP547030-16     Back to Search: Records
  IDENTIFIERS:
  Sample ID: 16_IX_SB_20 Museum ID:
  Field ID: 16_IX_SB_20 Collection Code:
  Deposited In: University of New England
 

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  TAXONOMY:
  Phylum: Chordata Subfamily:
  Class: Actinopterygii Genus: Fundulus
  Order: Cyprinodontiformes Species: Fundulus heteroclitus
  Family: Fundulidae Subspecies:
  BIN (Cluster ID): BOLD:AAB8943
  * Barcode Index Numbers(BIN): cluster barcode sequences to create OTUs that closely reflect species groupings
  SPECIMEN DETAILS:
  Voucher Status: E-Vouchered: DNA/Tissue + Photo Reproduction: S
  Tissue Descriptor: Sex:
  Brief Note: Mummichug, Stuart Life Stage: Immature
  Detailed Notes: ::meta:{"specimen":["Stuart Baybutt","Deborah Landry"],"image":["Stuart Baybutt"],"trace_run_site":["Generic Commercial Lab"],"trace_upload":["Stuart Baybutt","Deborah Landry"],"sequencing_run_site":["Generic Commercial Lab"],"sequence_upload":["Stuart Baybutt","Deborah Landry"]}::endMeta:
 
  COLLECTION DATA:
  Country: United States Date Collected: 2016-08-27
  Province/State: Maine Collectors: Stuart Baybutt
  Region/County: Casco Bay    
  Sector:    
  Exact Site: Littlejohn Channel    
  Latitude: 43.7586 Elevation:
  Longitude: -70.137 Elv. Accuracy:
  Coord. Source: 5 Depth: 0.5 Meters
  Coord. Accuracy: 5 Meters Depth Accuracy :
 
 

  SEQUENCE: COI-5P   [Funding Source: N/A]
  Sequence ID: SDP547030-16.COI-5P GenBank Accession: KY250732
  Last Updated: 2017-10-16 Genome: Mitochondrial
  Locus: Cytochrome Oxidase Subunit 1 5' Region
  Nucleotides: 652 bp
 
CCTTTATTTAGTATTTGGTGCNTGAGCCGGTATAGTAGGTACAGCTCTTAGCCTTCTTATTCGGGCGGAACTAAG
CCAACCAGGCTCCCTCCTAGGGGATGACCAAATTTATAATGTAATCGTTACAGCACATGCATTTGTAATAATCTT
TTTTATAGTTATGCCTATTATAATTGGTGGTTTTGGAAATTGACTAGTCCCTCTTATGATTGGTGCCCCAGACAT
AGCTTTTCCTCGAATAAATAATATAAGCTTCTGACTACTCCCACCCTCATTTTTACTTCTTTTAGCCTCTTCCGG
TGTTGAAGCCGGGGCTGGTACAGGTTGAACAGTCTATCCCCCTCTAGCAGGTAATTTAGCTCATGCTGGGGCTTC
TGTAGATTTAACTATTTTTTCCCTTCACTTAGCTGGTATTTCATCAATTTTAGGTGCTATTAATTTTATTACAAC
TATTATTAACATAAAACCTCCAGCTATCTCCCAATACCAAACCCCTCTGTTCGTCTGAGCTGTCTTAATTACTGC
TGTACTTCTTCTACTTTCCTTACCAGTTCTTGCTGCANNAATTACAATACTGTTAACTGACCGAAATTTAAATAC
TACATTTTTTGATCCGGCAGGCGGAGGAGATCCAATTCTATACCAACATTTA
  Amino Acids:  
 
LYLVFGXWAGMVGTALSLLIRAELSQPGSLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDM
AFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITT
IINMKPPAISQYQTPLFVWAVLITAVLLLLSLPVLAAXITMLLTDRNLNTTFFDPAGGGDPILYQHL
  Illustrative Barcode:
 
   

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  ELECTROPHEROGRAM TRACE FILES: COI-5P
  Length Pcr Primers Seq Primer Read Status Run Date  
525 C_FishF1t1 / C_FishR1t1
M13R
Reverse high qual 2016-09-13  
530 C_FishF1t1 / C_FishR1t1
M13F-20
Forward high qual 2016-09-13  
 
Generated using the BOLD API

													
  Specimen Images:
  License:
CreativeCommons - Attribution Share-Alike (2016)
  License Holder:
Unspecified, University of New England

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Collection Site:

  Attribution:
Specimen Depository: University of New England
Sequencing Center:
Photography: Deborah Landry, University of New England
Collectors: Stuart Baybutt
Specimen Identification: Student
Project Manager: Student Portal Manager
Sequencing Support: