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Specimen Data Sequences Combined
  Record Details For SDP396023-15     Back to Search: Records
  IDENTIFIERS:
  Sample ID: 15_UNE_LEM_002 Museum ID:
  Field ID: 15_UNE_LEM_002 Collection Code:
  Deposited In: University of New England
 

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  TAXONOMY:
  Phylum: Arthropoda Subfamily: Pangoniinae
  Class: Insecta Genus: Stonemyia
  Order: Diptera Species: Stonemyia rasa
  Family: Tabanidae Subspecies:
  BIN (Cluster ID): BOLD:ABA5305
  * Barcode Index Numbers(BIN): cluster barcode sequences to create OTUs that closely reflect species groupings
  SPECIMEN DETAILS:
  Voucher Status: E-Vouchered: DNA/Tissue + Photo Reproduction:
  Tissue Descriptor: DNA Sex:
  Brief Note: Fly LenaMoser, #15, Session 2 DL09, DL10 Life Stage: Adult
  Detailed Notes: ::meta:{ specimen :[ Lena Moser ], trace_run_site :[ Generic Commercial Lab ], trace_upload :[ Lena Moser , Deborah Landry ], image :[ Lena Moser ], sequencing_run_site :[ Generic Commercial Lab ], sequence_upload :[ Lena Moser ]}::endMeta:Collected on the surface of the sand where the organism landed, next to a sandy-bottomed, brackish river.
 
  COLLECTION DATA:
  Country: United States Date Collected: 2015-08-10
  Province/State: Maine Collectors: Lena Moser
  Region/County: Saco River, Maine    
  Sector:    
  Exact Site: Freddie's Beach    
  Latitude: 43.46 Elevation:
  Longitude: -70.379 Elv. Accuracy:
  Coord. Source: Depth:
  Coord. Accuracy: 5 Meters Depth Accuracy :
 
 

  SEQUENCE: COI-5P   [Funding Source: N/A]
  Sequence ID: SDP396023-15.COI-5P GenBank Accession: KU564531
  Last Updated: 2017-10-16 Genome: Mitochondrial
  Locus: Cytochrome Oxidase Subunit 1 5' Region
  Nucleotides: 658 bp
 
TACTCTATACTTTATCTTCGGAGCATGAGCGGGAATAATTGGAACTTCATTAAGAATTCTAATCCGGGCTGAATT
AGGTCATCCAGGGGCATTAATTGGAGATGATCAAATTTATAATGTAATTGTTACAGCTCATGCATTCGTCATAAT
TTTCTTTATAGTAATACCTATTATAATTGGAGGATTTGGTAATTGATTAGTTCCTTTAATATTAGGAGCACCTGA
TATAGCTTTTCCTCGAATAAATAATATAAGTTTTTGATTATTACCTCCATCATTGACCCTCCTACTCGCGAGTAG
TATAGTTGAAAATGGGGCTGGAACAGGTTGAACTGTTTACCCTCCCCTATCTTCTACAATTGCTCATGCAGGAGG
ATCAGTTGACTTAGCAATTTTTTCTCTACATTTAGCAGGGGTTTCCTCAATTCTAGGAGCAGTAAATTTTATTAC
AACTGTTATTAATATACGATCAACAGGAATTACTTTTGATCGCATACCTTTATTTGTATGATCTGTTGTAATTAC
AGCTATTTTACTTCTTTTATCATTACCAGTTCTTGCTGGTGCTATTACTATATTATTAACAGATCGAAATTTAAA
TACTTCATTTTTTGATCCTGCAGGAGGAGGAGATCCTATTTTATATCAACATCTATTT
  Amino Acids:  
 
TLYFIFGAWAGMIGTSLSILIRAELGHPGALIGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMLGAPD
MAFPRMNNMSFWLLPPSLTLLLASSMVENGAGTGWTVYPPLSSTIAHAGGSVDLAIFSLHLAGVSSILGAVNFIT
TVINMRSTGITFDRMPLFVWSVVITAILLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLF
  Illustrative Barcode:
 
   

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  ELECTROPHEROGRAM TRACE FILES: COI-5P
  Length Pcr Primers Seq Primer Read Status Run Date  
667 VF2 / VR1
M13F-20
Forward high qual 2015-08-12  
670 VF2 / VR1
M13R
Reverse high qual 2015-08-12  
 
Generated using the BOLD API

													
  Specimen Images:
  License:
CreativeCommons - Attribution Share-Alike (2015)
  License Holder:
Unspecified, University of New England

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  License:
CreativeCommons - Attribution Share-Alike (2015)
  License Holder:
Unspecified, University of New England

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Collection Site:

  Attribution:
Specimen Depository: University of New England
Sequencing Center:
Photography: Lena Moser, University of New England
Collectors: Lena Moser
Specimen Identification: Student
Project Manager: Student Portal Manager
Sequencing Support: