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Specimen Data Sequences Combined
  Record Details For SDP396010-15     Back to Search: Records
  IDENTIFIERS:
  Sample ID: 15_UNE_CB_001 Museum ID:
  Field ID: 15_UNE_CB_001 Collection Code:
  Deposited In: University of New England
 

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  TAXONOMY:
  Phylum: Chordata Subfamily: Pholinae
  Class: Actinopterygii Genus: Pholis
  Order: Scorpaeniformes Species: Pholis gunnellus
  Family: Pholidae Subspecies:
  BIN (Cluster ID): BOLD:AAB4286
  * Barcode Index Numbers(BIN): cluster barcode sequences to create OTUs that closely reflect species groupings
  SPECIMEN DETAILS:
  Voucher Status: E-Vouchered: DNA/Tissue + Photo Reproduction:
  Tissue Descriptor: DNA Sex:
  Brief Note: RockGunnel, ChelseaB, #1, DL01, DL02 Life Stage: Immature
  Detailed Notes: ::meta:{ specimen :[ Chelsea Brittain ], image :[ Chelsea Brittain ], trace_run_site :[ Generic Commercial Lab ], trace_upload :[ Chelsea Brittain ], sequencing_run_site :[ Generic Commercial Lab ], sequence_upload :[ Chelsea Brittain ]}::endMeta:Specimen was roughly 11.5 cm in length. Eel/snake-like organism. Darker brown on the head more tan and lighter toward the tail. Not solid color, black triangles along spine.
 
  COLLECTION DATA:
  Country: Atlantic Ocean Date Collected: 2015-07-16
  Province/State: Collectors: C.Brittain
  Region/County: Casco Bay, Maine    
  Sector:    
  Exact Site: Chebeague Channel    
  Latitude: 43.735 Elevation:
  Longitude: -70.141 Elv. Accuracy:
  Coord. Source: Depth: 7 Meters
  Coord. Accuracy: 5 Meters Depth Accuracy : 5 Meters
 
 

  SEQUENCE: COI-5P   [Funding Source: N/A]
  Sequence ID: SDP396010-15.COI-5P GenBank Accession: KU564526
  Last Updated: 2017-10-16 Genome: Mitochondrial
  Locus: Cytochrome Oxidase Subunit 1 5' Region
  Nucleotides: 634 bp
 
TGCATGAGCCGGAATAGTAGGCACAGCTCTAAGCCTCCTCATTCGAGCAGAGTTAAGCCAGCCCGGCGCCCTACT
AGGCGACGACCAAATTTATAATGTAATTGTTACAGCACATGCATTCGTAATAATTTTCTTTATAGTAATACCAAT
CATGATCGGGGGCTTCGGAAACTGACTCATCCCCTTAATGATTGGGGCCCCAGACATGGCGTTCCCCCGTATAAA
TAACATGAGTTTTTGGCTTCTTCCTCCTTCTTTCCTTCTTCTCCTTGCCTCTTCTGGGGTTGAGGCGGGAGCTGG
TACAGGGTGAACGGTATACCCGCCCCTTTCTGGTAATTTAGCGCACGCCGGGGCCTCCGTTGATTTAACAATCTT
TTCTCTTCATCTGGCGGGGATTTCTTCAATTCTTGGGGCAATTAACTTTATCACAACCATTATTAACATAAAACC
TCCTGCCATTTCTCAGTATCAAACACCGCTCTTCGTTTGATCCGTACTTATTACCGCCGTTCTTCTGCTCCTTTC
CCTCCCCGTGCTAGCAGCCGGAATCACCATACTTCTGACAGATCGTAATCTTAACACTACCTTTTTTGATCCCGC
AGGAGGGGGTGACCCAATTCTTTACCAACACTTA
  Amino Acids:  
 
AWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMN
NMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLSGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKP
PAISQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHL
  Illustrative Barcode:
 
   

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  ELECTROPHEROGRAM TRACE FILES: COI-5P
  Length Pcr Primers Seq Primer Read Status Run Date  
649 FishF2 / FishR2
M13F-20
Forward high qual 2015-08-07  
650 FishF2 / FishR2
M13R
Reverse high qual 2015-08-07  
 
Generated using the BOLD API

													
  Specimen Images:
  License:
CreativeCommons - Attribution Share-Alike (2015)
  License Holder:
Unspecified, University of New England

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  License:
CreativeCommons - Attribution Share-Alike (2015)
  License Holder:
Unspecified, University of New England

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  License:
CreativeCommons - Attribution Share-Alike (2015)
  License Holder:
Unspecified, University of New England

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Collection Site:

  Attribution:
Specimen Depository: University of New England
Sequencing Center:
Photography: , University of New England D. Landry, University of New England
Collectors: C.Brittain
Specimen Identification: Student
Project Manager: Student Portal Manager
Sequencing Support: