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Specimen Data Sequences Combined
  Record Details For SDP258010-15     Back to Search: Records
  IDENTIFIERS:
  Sample ID: 14_UNE_BG_001 Museum ID:
  Field ID: 14_UNE_BG_001 Collection Code:
  Deposited In: University of New England
 

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  TAXONOMY:
  Phylum: Arthropoda Subfamily:
  Class: Malacostraca Genus: Crangon
  Order: Decapoda Species: Crangon septemspinosa
  Family: Crangonidae Subspecies:
  BIN (Cluster ID): BOLD:AAB5942
  * Barcode Index Numbers(BIN): cluster barcode sequences to create OTUs that closely reflect species groupings
  SPECIMEN DETAILS:
  Voucher Status: E-Vouchered:DNA/Tissue+Photo Reproduction:
  Tissue Descriptor: DNA Sex:
  Brief Note: Life Stage:
  Detailed Notes: ::meta:{"specimen":["Betsy Grannis"],"image":["Betsy Grannis"],"trace_run_site":["Generic Commercial Lab"],"trace_upload":["Betsy Grannis"],"sequencing_run_site":["Generic Commercial Lab"],"sequence_upload":["Betsy Grannis"]}::endMeta:Organism: 52mm. Collected with seine net along Freddy Beach. Tissue taken from last abdominal segment.
 
  COLLECTION DATA:
  Country: Atlantic Ocean Date Collected: 2014-08-04
  Province/State: Collectors: B. Grannis
  Region/County: Saco River    
  Sector:    
  Exact Site: Freddie's Beach / UNE    
  Latitude: 43.4603 Elevation:
  Longitude: -70.3794 Elv. Accuracy:
  Coord. Source: Depth: 1 Meters
  Coord. Accuracy: 1 Meters Depth Accuracy :
 
 

  SEQUENCE: COI-5P   [Funding Source: N/A]
  Sequence ID: SDP258010-15.COI-5P GenBank Accession: KT601627
  Last Updated: 2017-10-16 Genome: Mitochondrial
  Locus: Cytochrome Oxidase Subunit 1 5' Region
  Nucleotides: 658 bp
 
AACTTTATATTTTATCTTTGGAGCATGAGCTGGAATAGTAGGAACAGCATTAAGTTTATTAATCCGAGCAGAACT
GGGGTCTCCTGGTAGATTGATTGGAAATGATCAAATTTATAATGTAGTTGTCACAGCACATGCTTTCGTAATAAT
TTTCTTTATAGTAATGCCTATTCTTATTGGAGGATTTGGAAATTGATTAGTACCTTTAATACTAGGGGCACCTGA
TATGGCTTTCCCACGTATAAATAATATAAGATTCTGATTACTCCCCCCTGCTTTAACTCTTCTTTTATCTAGGGG
TTTAGTAGAAAGTGGAGTCGGAACTGGCTGAACAGTTTATCCTCCACTATCAGCAGGAATTGCCCACGCTGGGGC
TTCAGTCGACATAGGAATTTTTTCTCTACATTTAGCCGGGGTATCATCTATTCTAGGTGCTATTAATTTTATTAC
AACAGTAATCAATATGCGAGCCGCTGGTATAACTATAGACCGACTTCCTTTATTTGTTTGGTCTGTATTCTTAAC
GGCCATTCTTTTGCTTCTCTCATTGCCAGTTTTAGCCGGTGCTATTACTATACTTTTAACAGATCGAAATTTAAA
TACTTCTTTCTTCGACCCAGTGGGAGGTGGTGACCCTATTTTATATCAACATTTATTC
  Amino Acids:  
 
TLYFIFGAWAGMVGTALSLLIRAELGSPGSLIGNDQIYNVVVTAHAFVMIFFMVMPILIGGFGNWLVPLMLGAPD
MAFPRMNNMSFWLLPPALTLLLSSGLVESGVGTGWTVYPPLSAGIAHAGASVDMGIFSLHLAGVSSILGAINFIT
TVINMRAAGMTMDRLPLFVWSVFLTAILLLLSLPVLAGAITMLLTDRNLNTSFFDPVGGGDPILYQHLF
  Illustrative Barcode:
 
   

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  ELECTROPHEROGRAM TRACE FILES: COI-5P
  Length Pcr Primers Seq Primer Read Status Run Date  
604 LCO1490 / HCO2198
M13R
Reverse high qual 2014-08-07  
614 LCO1490 / HCO2198
M13F-20
Forward high qual 2014-08-07  
 
Generated using the BOLD API

													
  Specimen Images:
  License:
CreativeCommons - Attribution Share-Alike (2015)
  License Holder:
Unspecified, University of New England

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Collection Site:

  Attribution:
Specimen Depository: University of New England
Sequencing Center:
Photography: B. Grannis, University of New England
Collectors: B. Grannis
Specimen Identification: Student
Project Manager: Student Portal Manager
Sequencing Support: