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Specimen Data Sequences Combined
  Record Details For RRSSA2350-15     Back to Search: Records
  IDENTIFIERS:
  Sample ID: BIOUG22635-H06 Museum ID: BIOUG22635-H06
  Field ID: L#15RARE-0143 Collection Code:
  Deposited In: Centre for Biodiversity Genomics
 

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  TAXONOMY:
  Phylum: Arthropoda Subfamily: Harpalinae
  Class: Insecta Genus: Badister
  Order: Coleoptera Species: Badister obtusus
  Family: Carabidae Subspecies:
  BIN (Cluster ID): BOLD:AAG4434
  * Barcode Index Numbers(BIN): cluster barcode sequences to create OTUs that closely reflect species groupings
  SPECIMEN DETAILS:
  Voucher Status: Vouchered:Registered Collection Reproduction:
  Tissue Descriptor: Tissue Sex:
  Brief Note: Life Stage: A
  Detailed Notes:
 
  COLLECTION DATA:
  Country: Canada Date Collected: 2015-05-31
  Province/State: Ontario Collectors: BIO Collections Staff
  Region/County: Cambridge    
  Sector: rare Charitable Research Reserve    
  Exact Site: Hogsback Forest, forest edge    
  Latitude: 43.3739 Elevation: 332 Meters
  Longitude: -80.354 Elv. Accuracy:
  Coord. Source: GPS Depth:
  Coord. Accuracy: Depth Accuracy :
 
  PUBLICATIONS:
  Thomas W. A. Braukmann, Natalia V. Ivanova Sean W. J. Prosser Vasco Elbrecht Dirk Steinke Sujeevan Ratnasingham Jeremy R. deWaard Jayme E. Sones Evgeny V. Zakharov Paul D. N. Hebert Metabarcoding a Diverse Arthropod Mock Community Molecular Ecology Resources 2019-02-18
  Thomas WA Braukmann, Natalia V Ivanova, Sean WJ Prosser, Vasco Elbrecht, Dirk Steinke, Sujeevan Ratnasingham, Jeremy R deWaard, Jayme E Sones, Evgeny V Zakhariv, Paul DN Hebert Revealing the Complexities of Metabarcoding with a Diverse Arthropod Mock Community Molecular Ecology Resources 2018-10-02
 
 

  SEQUENCE: COI-5P   [Funding Source: N/A]
  Sequence ID: RRSSA2350-15.COI-5P GenBank Accession: MG057395
  Last Updated: 2024-09-24 Genome: Mitochondrial
  Locus: Cytochrome Oxidase Subunit 1 5' Region
  Nucleotides: 658 bp
 
AACATTATATTTTATCTTTGGAGCTTGAGCAGGAATAGTAGGAACTTCATTAAGAGTGTTAATTCGAGCAGAATT
AGGAAACCCTGGATCATTAATTGGGGATGACCAAATTTATAATGTTATTGTTACTGCACATGCTTTTGTAATAAT
TTTTTTTATAGTTATACCAATTATAATCGGAGGATTTGGAAATTGATTAGTTCCACTAATATTAGGAGCTCCTGA
TATAGCATTCCCTCGAATAAATAACATAAGTTTTTGATTACTCCCTCCTTCATTAACATTACTTTTAATGAGCAG
TTTAGTAGAAAGAGGGGCTGGGACAGGATGAACAGTATACCCTCCCCTATCATCAGGAATTGCACATAGAGGAGC
ATCTGTAGATTTAGCAATTTTTAGACTTCATTTAGCCGGTGTTTCATCAATTTTAGGAGCTGTAAATTTTATTAC
AACAATTATTAATATACGATCAACAGGAATTACATTTGATCGAATACCATTATTTGTATGATCAGTAGGAATTAC
TGCTCTTTTATTATTATTATCATTACCTGTATTAGCTGGAGCTATTACTATACTTTTAACTGATCGAAATTTAAA
TACTTCTTTTTTCGATCCAGCAGGAGGAGGTGATCCAATTCTTTATCAACATTTATTT
  Amino Acids:  
 
TLYFIFGAWAGMVGTSLSVLIRAELGNPGSLIGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMLGAPD
MAFPRMNNMSFWLLPPSLTLLLMSSLVESGAGTGWTVYPPLSSGIAHSGASVDLAIFSLHLAGVSSILGAVNFIT
TIINMRSTGITFDRMPLFVWSVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLF
  Illustrative Barcode:
 
   

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  ELECTROPHEROGRAM TRACE FILES: COI-5P
  Length Pcr Primers Seq Primer Read Status Run Date  
617 C_LepFolF / C_LepFolR
C_LepFolR
Reverse med qual 2016-06-17  
623 C_LepFolF / C_LepFolR
C_LepFolF
Forward med qual 2016-06-17  
598 C_LepFolF / C_LepFolR
C_LepFolR
Reverse med qual 2015-08-22  
 
Generated using the BOLD API

													
  Specimen Images: N/A
Collection Site:

  Attribution:
Specimen Depository: Centre for Biodiversity Genomics
Sequencing Center:
Photography:
Collectors: BIO Collections Staff
Specimen Identification: Monica R. Young
Project Manager: CBG Project Management Team
Sequencing Support: