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Specimen Data Sequences Combined
  Record Details For RRINV3059-15     Back to Search: Records
  IDENTIFIERS:
  Sample ID: BIOUG24032-B07 Museum ID: BIOUG24032-B07
  Field ID: L#15RBB-001A Collection Code:
  Deposited In: Centre for Biodiversity Genomics
 

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  TAXONOMY:
  Phylum: Arthropoda Subfamily: Baetinae
  Class: Insecta Genus: Baetis
  Order: Ephemeroptera Species: Baetis intercalaris
  Family: Baetidae Subspecies:
  BIN (Cluster ID): BOLD:AAM2026
  * Barcode Index Numbers(BIN): cluster barcode sequences to create OTUs that closely reflect species groupings
  SPECIMEN DETAILS:
  Voucher Status: Vouchered:Registered Collection Reproduction:
  Tissue Descriptor: Whole Voucher Sex:
  Brief Note: Life Stage:
  Detailed Notes:
 
  COLLECTION DATA:
  Country: Canada Date Collected: 2015-08-16
  Province/State: Ontario Collectors: rare BioBlitz collecting team
  Region/County: Cambridge    
  Sector: rare Charitable Research Reserve    
  Exact Site: Grand River    
  Latitude: 43.3843 Elevation: 269 Meters
  Longitude: -80.3539 Elv. Accuracy:
  Coord. Source: GPS Depth:
  Coord. Accuracy: Depth Accuracy :
 
  PUBLICATIONS:
  Angela C Telfer, Monica R Young, Jenna Quinn, Kate Perez, Crystal N Sobel, Jayme E Sones, Valerie Levesque-Beaudin, Rachael Derbyshire, Jose Fernandez-Triana, Rodolphe Rougerie, Paul D N Hebert, Jeremy R deWaard and contributors. Biodiversity inventories in high gear: DNA barcoding facilitates a rapid biotic survey of a temperate nature reserve Biodiversity Data Journal 2015-08-30;3(e6313):1-176 (PDF)
 
 

  SEQUENCE: COI-5P   [Funding Source: N/A]
  Sequence ID: RRINV3059-15.COI-5P GenBank Accession: KT708054
  Last Updated: 2024-09-24 Genome: Mitochondrial
  Locus: Cytochrome Oxidase Subunit 1 5' Region
  Nucleotides: 558 bp
 
TACTCTTTATTTTATTTTTGGTGCGTGGTCGGGGATAGTGGGTACCTCTTTGAGATTATTAATTCGAGCTGAGTT
GGGCAACCCTGGGTCATTAATTGGGGATGACCAAATTTATAATGTTATTGTGACAGCTCATGCTTTTATTATAAT
TTTTTTTATAGTGATACCAATTATAATTGGGGGTTTTGGTAATTGGCTGGTTCCACTTATGCTAGGGGCTCCAGA
TATGGCTTTCCCACGTATAAATAACATGAGATTTTGAATGTTACCACCCTCTTTAACACTATTAGTTTCAAGAAG
TTTAGTTGATGTGGGAGCGGGCACTGGATGGACTGTGTACCCTCCGTTGGCAGCTAATATCGCCCATGGGGGTTC
TTCTGTGGATTTTGCCATTTTTTCTCTTCATTTAGCAGGGGTGTCGTCAATTTTAGGCGCTGTAAATTTTATTAC
AACTGTTGTAAATATGCGTAGCCCGGGTATAACTTTGGATCGGATGCCTTTATTTGTTTGATCAGTAGTAATTAC
TGCGGTGTTGTTATTGCTATCTTTACCTGTGCT
  Amino Acids:  
 
TLYFIFGAWSGMVGTSLSLLIRAELGNPGSLIGDDQIYNVIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMLGAPD
MAFPRMNNMSFWMLPPSLTLLVSSSLVDVGAGTGWTVYPPLAANIAHGGSSVDFAIFSLHLAGVSSILGAVNFIT
TVVNMRSPGMTLDRMPLFVWSVVITAVLLLLSLPVX
  Illustrative Barcode:
 
   

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  ELECTROPHEROGRAM TRACE FILES: COI-5P
  Length Pcr Primers Seq Primer Read Status Run Date  
590 C_LepFolF / C_LepFolR
C_LepFolR
Reverse med qual 2015-08-18  
 
Generated using the BOLD API

													
  Specimen Images: N/A
Collection Site:

  Attribution:
Specimen Depository: Centre for Biodiversity Genomics
Sequencing Center:
Photography:
Collectors: rare BioBlitz collecting team
Specimen Identification: Angela Telfer
Project Manager: CBG Project Management Team
Sequencing Support: