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Specimen Data Sequences Combined
  Record Details For RRGCO736-15     Back to Search: Records
  IDENTIFIERS:
  Sample ID: BIOUG24832-F01 Museum ID: BIOUG24832-F01
  Field ID: L#15RBB-001T Collection Code:
  Deposited In: Centre for Biodiversity Genomics
 

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  TAXONOMY:
  Phylum: Arthropoda Subfamily: Olethreutinae
  Class: Insecta Genus: Endothenia
  Order: Lepidoptera Species: Endothenia hebesana
  Family: Tortricidae Subspecies:
  BIN (Cluster ID): BOLD:AAA3308
  * Barcode Index Numbers(BIN): cluster barcode sequences to create OTUs that closely reflect species groupings
  SPECIMEN DETAILS:
  Voucher Status: Vouchered:Registered Collection Reproduction:
  Tissue Descriptor: Tissue Sex:
  Brief Note: Life Stage:
  Detailed Notes:
 
  COLLECTION DATA:
  Country: Canada Date Collected: 2015-08-16
  Province/State: Ontario Collectors: rare BioBlitz collecting team
  Region/County: Cambridge    
  Sector: rare Charitable Research Reserve    
  Exact Site: Grand River    
  Latitude: 43.3843 Elevation: 269 Meters
  Longitude: -80.3539 Elv. Accuracy:
  Coord. Source: GPS Depth:
  Coord. Accuracy: Depth Accuracy :
 
  PUBLICATIONS:
  Thomas W. A. Braukmann, Natalia V. Ivanova Sean W. J. Prosser Vasco Elbrecht Dirk Steinke Sujeevan Ratnasingham Jeremy R. deWaard Jayme E. Sones Evgeny V. Zakharov Paul D. N. Hebert Metabarcoding a Diverse Arthropod Mock Community Molecular Ecology Resources 2019-02-18
  Thomas WA Braukmann, Natalia V Ivanova, Sean WJ Prosser, Vasco Elbrecht, Dirk Steinke, Sujeevan Ratnasingham, Jeremy R deWaard, Jayme E Sones, Evgeny V Zakhariv, Paul DN Hebert Revealing the Complexities of Metabarcoding with a Diverse Arthropod Mock Community Molecular Ecology Resources 2018-10-02
 
 

  SEQUENCE: COI-5P   [Funding Source: iBOL:WG1.9]
  Sequence ID: RRGCO736-15.COI-5P GenBank Accession: MG364774
  Last Updated: 2024-09-24 Genome: Mitochondrial
  Locus: Cytochrome Oxidase Subunit 1 5' Region
  Nucleotides: 658 bp
 
AACATTATATTTTATTTTTGGTATTTGAGCTGGAATAGTAGGAACTTCATTAAGACTATTAATTCGAGCTGAATT
AGGAAATCCCGGATCATTAATTGGAGATGATCAAATTTATAATACTATTGTCACTGCACATGCTTTCATTATAAT
TTTTTTTATGGTAATGCCTATTATAATTGGCGGATTTGGAAATTGATTAGTACCCTTAATATTAGGAGCCCCTGA
TATAGCTTTTCCACGAATAAATAATATAAGATTTTGATTATTACCTCCCTCTATTATATTATTAATTTCGAGTAG
AATTGTAGAAAATGGAGCAGGAACTGGATGAACAGTTTATCCCCCACTTTCATCAAATATTGCCCATAGCGGAAG
ATCTGTAGATCTTGCTATTTTTTCTCTACATTTAGCCGGAATTTCGTCAATTTTAGGAGCTGTAAATTTTATTAC
AACTATTATTAATATACGACCTAATAATATATCTTTAGATCAAATACCATTATTTGTCTGAGCTGTAGGAATTAC
TGCTTTATTACTCCTTTTATCTTTACCTGTCTTAGCTGGTGCTATTACTATATTATTAACTGATCGAAACTTAAA
TACATCATTTTTTGATCCAGCTGGTGGAGGTGATCCAATTTTATATCAACATTTATTT
  Amino Acids:  
 
TLYFIFGIWAGMVGTSLSLLIRAELGNPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMLGAPD
MAFPRMNNMSFWLLPPSIMLLISSSIVENGAGTGWTVYPPLSSNIAHSGSSVDLAIFSLHLAGISSILGAVNFIT
TIINMRPNNMSLDQMPLFVWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLF
  Illustrative Barcode:
 
   

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  ELECTROPHEROGRAM TRACE FILES: COI-5P
  Length Pcr Primers Seq Primer Read Status Run Date  
617 C_LepFolF / C_LepFolR
C_LepFolR
Reverse high qual 2016-06-18  
628 C_LepFolF / C_LepFolR
C_LepFolF
Forward high qual 2016-06-18  
618 C_LepFolF / C_LepFolR
C_LepFolR
Reverse high qual 2015-10-27  
 
Generated using the BOLD API

													
  Specimen Images: N/A
Collection Site:

  Attribution:
Specimen Depository: Centre for Biodiversity Genomics
Sequencing Center:
Photography:
Collectors: rare BioBlitz collecting team
Specimen Identification: Kate Perez
Project Manager: CBG Project Management Team
Sequencing Support: International Barcode of Life (WG1.9)