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Specimen Data Sequences Combined
  Record Details For NONEP064-21     Back to Search: Records
  IDENTIFIERS:
  Sample ID: BON_88_2020 Museum ID: USNM 1673985
  Field ID: BON_88_2020 Collection Code:
  Deposited In: Smithsonian Institution, National Museum of Natural History
 

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  TAXONOMY:
  Phylum: Nemertea Subfamily:
  Class: Hoplonemertea Genus: Zygonemertes
  Order: Monostilifera Species: Zygonemertes sp. BOBA014
  Family: Amphiporidae Subspecies:
  BIN (Cluster ID): BOLD:AEK0256
  * Barcode Index Numbers(BIN): cluster barcode sequences to create OTUs that closely reflect species groupings
  SPECIMEN DETAILS:
  Voucher Status: Reproduction:
  Tissue Descriptor: Sex:
  Brief Note: Life Stage: adult
  Detailed Notes:
 
  COLLECTION DATA:
  Country: United States Date Collected: 2020-09-02
  Province/State: California Collectors: Isaiah Bluestein and Evan Tjeerdema
  Region/County: Pacific Ocean    
  Sector:    
  Exact Site: USCG Station, Bodega Harbor    
  Latitude: 38.3131 Elevation:
  Longitude: -123.051 Elv. Accuracy:
  Coord. Source: Depth:
  Coord. Accuracy: Depth Accuracy :
 
 

  SEQUENCE: COI-5P   [Funding Source: N/A]
  Sequence ID: NONEP064-21.COI-5P GenBank Accession: OQ075712
  Last Updated: 2024-09-24 Genome: Mitochondrial
  Locus: Cytochrome Oxidase Subunit 1 5' Region
  Nucleotides: 658 bp
 
TTCTTTATATTTTTTATTTGGTGTTTGATCTGGTTTGGTTGGAACTGCTTTGAGTTTATTAATTCGTGCTGAGTT
AGGTCAGCCCGGTGCTTTGTTAGGTGACGATCACCTGTATAATGTTATTGTAACAGCTCATGCTTTTGTAATAAT
TTTTTTTTTAGTAATACCTGTGATAATTGGTGGTTTTGGTAATTGGCTAGTTCCTTTAATGTTAGGGGCCCCAGA
TATGGCTTTTCCACGAATAAATAACATGAGTTTTTGGCTATTACCTCCTGCTTTAACTCTTTTACTTTTTTCTGG
TGCAGTAGAGAGTGGTGCTGGTACTGGTTGGACTGTGTACCCTCCTCTTTCTAGGAATGTTGCTCATGCTGGTGG
TTCTGTTGATTTAGCCATTTTTTCTCTTCATCTTGCTGGTGTTTCTTCTATTCTTGGTGCAATTAATTTTATTAC
TACTATTATTAATATGCGGTGGTATGGAATGCAGTTTGAGCGATTGTCTTTATTTGTTTGGTCTGTAAAAATTAC
TGCAGTTCTTCTTCTTTTATCTCTTCCTGTTTTAGCTGGTGCCATTACTATGCTTTTAACTGATCGTAATTTTAA
TACTTCTTTCTTTGATCCTGCTGGTGGTGGGGATCCGATCTTATATCAGCACTTGTTT
  Amino Acids:  
 
SLYFLFGVWSGLVGTALSLLIRAELGQPGALLGDDHLYNVIVTAHAFVMIFFLVMPVMIGGFGNWLVPLMLGAPD
MAFPRMNNMSFWLLPPALTLLLFSGAVESGAGTGWTVYPPLSSNVAHAGGSVDLAIFSLHLAGVSSILGAINFIT
TIINMRWYGMQFERLSLFVWSVKITAVLLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQHLF
  Illustrative Barcode:
 
   

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  ELECTROPHEROGRAM TRACE FILES: COI-5P
  Length Pcr Primers Seq Primer Read Status Run Date  
585 LCO1490 / HCO2198
LCO1490
f high qual 2020-11-13  
635 LCO1490 / HCO2198
HCO2198
r high qual 2020-11-18  
445 16Sar-L / 16SKR
16SKR
r med qual 2021-03-05  
465 16Sar-L / 16SKR
16Sar-L
f med qual 2021-03-05  
 

  SEQUENCE: 16S   [Funding Source: N/A]
  Sequence ID: NONEP064-21.16S GenBank Accession: OQ075769
  Last Updated: 2024-09-24 Genome: Mitochondrial
  Locus: 16S Ribosomal RNA
  Nucleotides: 459 bp
 
TCTGCTCGATGATTTTTAAATGGCCGCGGTAATTTGACCGTGCAAAGGTAGCATAATCACTTGCCCTATAATTGA
GGGCTAGAATGAATGGAATTACAAGATCCTTGCTTTATTAGAAAAAAAAAAATAATTTTCTTTTTTAGTGAAGAA
GCTAAAATTTGACTGTGGGACAAGAAGACCCTTTTGAGCTTTATTGTTTATTTTTTTAAAAAACTTTAACAATTT
GGTTGGGGCGACCAAGGAAGGGTGGATCTTCCTTAATTAACTATGATCTGTTGTTTTCGATTAAAGGAACAAGCT
ACCTAAGGGATAACAGCGTAATTTTTTTTGTGAGTTCTTATTTAAAAAAAAGATTGCGACCTCGATGTTGACTTA
TAATTTCCATTTGGTGTAGCAGCTAATATGGTAGGTCTGTTCGACCTTTAAAATTTTACGTGAGTTGAGTTCAGA
CCGGCGTGA
  Amino Acids:  
 
  Illustrative Barcode:
 
   

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Generated using the BOLD API

													
  Specimen Images:
  License:
CreativeCommons - Attribution Share-Alike (2024)
  License Holder:
Eric Sanford, University of California, Davis

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  License:
CreativeCommons - Attribution Share-Alike (2024)
  License Holder:
Eric Sanford, University of California, Davis

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  License:
CreativeCommons - Attribution Share-Alike (2024)
  License Holder:
Eric Sanford, University of California, Davis

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  License:
CreativeCommons - Attribution Share-Alike (2024)
  License Holder:
Eric Sanford, University of California, Davis

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Collection Site:

  Attribution:
Specimen Depository: Smithsonian Institution, National Museum of Natural History
Sequencing Center:
Photography: , University of California, Davis
Collectors: Isaiah Bluestein and Evan Tjeerdema
Specimen Identification: Christina I Ellison
Project Manager: Christina I Ellison
Sequencing Support: