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Specimen Data Sequences Combined
  Record Details For LOWCD149-06     Back to Search: Records
  IDENTIFIERS:
  Sample ID: CGWC-2969 Museum ID:
  Field ID: CGWC-2969 Collection Code:
  Deposited In: Centre for Biodiversity Genomics
 

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  TAXONOMY:
  Phylum: Arthropoda Subfamily: Plusiinae
  Class: Insecta Genus: Syngrapha
  Order: Lepidoptera Species: Syngrapha viridisigma
  Family: Noctuidae Subspecies:
  BIN (Cluster ID): BOLD:AAA8795
  * Barcode Index Numbers(BIN): cluster barcode sequences to create OTUs that closely reflect species groupings
  SPECIMEN DETAILS:
  Voucher Status: Reproduction:
  Tissue Descriptor: Sex:
  Brief Note: Life Stage:
  Detailed Notes:
 
  COLLECTION DATA:
  Country: Canada Date Collected: 1998-07-21
  Province/State: British Columbia Collectors: Guppy, C.S.
  Region/County:    
  Sector:    
  Exact Site: Quesnel; Schiste Creek; Hydraulic Rd    
  Latitude: Elevation: 792.49 Meters
  Longitude: Elv. Accuracy:
  Coord. Source: Depth:
  Coord. Accuracy: Depth Accuracy :
 
  PUBLICATIONS:
  Zahiri, Reza; Lafontaine, J. Donald; Schmidt, B. Christian; deWaard, Jeremy R.; Zakharov, Evgeny V.; Hebert, Paul D. N. A Transcontinental Challenge — A Test of DNA Barcode Performance for 1,541 Species of Canadian Noctuoidea (Lepidoptera) PLoS ONE ;9(3):e92797 (PDF)
  Reza Zahiri, J. Donald Lafontaine, B. Christian Schmidt, Jeremy R. deWaard, Evgeny V. Zakharov, Paul D. N. Hebert Probing planetary biodiversity with DNA barcodes: The Noctuoidea of North America PLoS ONE 2017-06-01;12(6):0-0 (PDF)
  Paul D. N. Hebert , Sujeevan Ratnasingham , Evgeny V. Zakharov , Angela C. Telfer , Valerie Levesque-Beaudin , Megan A. Milton , Stephanie Pedersen , Paul Jannetta and Jeremy R. deWaard Counting animal species with DNA barcodes: Canadian insects Philosophical transactions of the royal society b 2016-09-05;371(1702):0-0 (PDF)
  Sujeevan Ratnasingham and Paul D. N. Hebert A DNA-Based Registry for All Animal Species: The Barcode Index Number (BIN) System PLoS ONE 2013-07-13;8(7):e66213 (PDF)
 
 

  SEQUENCE: COI-5P   [Funding Source: N/A]
  Sequence ID: LOWCD149-06.COI-5P GenBank Accession: KC846263
  Last Updated: 2024-06-13 Genome: Mitochondrial
  Locus: Cytochrome Oxidase Subunit 1 5' Region
  Nucleotides: 658 bp
 
AACTCTATATTTTATTTTTGGTATTTGAGCTGGTATAGTTGGAACATCTTTAAGATTATTGATTCGAGCAGAATT
AGGAACCCCTGGATCTTTAATTGGAGATGACCAAATTTATAACACTATTGTTACAGCACATGCATTTATTATAAT
TTTTTTTATAGTTATACCTATTATAATTGGAGGATTTGGTAATTGACTTGTCCCTCTAATATTGGGAGCCCCTGA
TATAGCTTTTCCTCGAATAAATAATATAAGTTTCTGACTTTTACCCCCGTCTTTAACTTTATTAATTTCTAGAAG
AATTGTTGAAAATGGAGCTGGTACTGGATGAACAGTGTACCCCCCACTTTCATCCAATATTGCCCACGGAGGAAG
ATCCGTTGATTTAGCAATTTTTTCTTTACATTTAGCTGGAATTTCATCAATTTTAGGAGCAATTAATTTTATTAC
TACAATTATTAATATGCGATTAAACAGATTATCTTTTGATCAAATACCTTTATTTATTTGAGCTGTTGGAATTAC
AGCTTTTCTTTTATTACTTTCTTTACCTGTTTTAGCAGGGGCAATTACAATACTTTTAACGGATCGTAATTTAAA
TACTTCCTTTTTTGACCCTGCTGGAGGTGGAGACCCTATTTTATATCAACATTTATTT
  Amino Acids:  
 
TLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMLGAPD
MAFPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFIT
TIINMRLNSLSFDQMPLFIWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLF
  Illustrative Barcode:
 
   

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  ELECTROPHEROGRAM TRACE FILES: COI-5P
  Length Pcr Primers Seq Primer Read Status Run Date  
583 LepF1 / LepR1
LepR1
Reverse high qual 2006-03-04  
 
Generated using the BOLD API

													
  Specimen Images:
  License:
CreativeCommons - Attribution (2010)
  License Holder:
CBG Photography Group, Centre for Biodiversity Genomics

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Collection Site: N/A
  Attribution:
Specimen Depository: Centre for Biodiversity Genomics
Sequencing Center:
Photography: CBG Photography Group, Centre for Biodiversity Genomics
Collectors: Guppy, C.S.
Specimen Identification: Crispin S. Guppy
Project Manager: CBG Project Management Team
Sequencing Support: