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Specimen Data Sequences Combined
  Record Details For LNAUS5289-13     Back to Search: Records
  IDENTIFIERS:
  Sample ID: CCDB-20820-A07 Museum ID: USNM ENT 00906719
  Field ID: Collection Code:
  Deposited In: Smithsonian Institution, National Museum of Natural History
 

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  TAXONOMY:
  Phylum: Arthropoda Subfamily: Noctuinae
  Class: Insecta Genus: Abagrotis
  Order: Lepidoptera Species: Abagrotis alcandola
  Family: Noctuidae Subspecies:
  BIN (Cluster ID): BOLD:AAE2248
  * Barcode Index Numbers(BIN): cluster barcode sequences to create OTUs that closely reflect species groupings
  SPECIMEN DETAILS:
  Voucher Status: Vouchered:Registered Collection Reproduction: S
  Tissue Descriptor: Tissue Sex: M
  Brief Note: Life Stage: A
  Detailed Notes: Genitalia on slide 20-Jun-1939 U.F.G.C. # 2474|Genitalia slide J. Clarke USNM 33837
 
  COLLECTION DATA:
  Country: United States Date Collected: 1938-09-14
  Province/State: Arizona Collectors: S.E.Crumb
  Region/County: Cochise County    
  Sector:    
  Exact Site: Cave Creek    
  Latitude: 31.8967 Elevation:
  Longitude: -109.164 Elv. Accuracy:
  Coord. Source: Google Earth Depth:
  Coord. Accuracy: 7000 Meters Depth Accuracy :
 
  PUBLICATIONS:
  Reza Zahiri, J. Donald Lafontaine, B. Christian Schmidt, Jeremy R. deWaard, Evgeny V. Zakharov, Paul D. N. Hebert Probing planetary biodiversity with DNA barcodes: The Noctuoidea of North America PLoS ONE 2017-06-01;12(6):0-0 (PDF)
 
 

  SEQUENCE: COI-5P   [Funding Source: iBOL:WG1.9]
  Sequence ID: LNAUS5289-13.COI-5P GenBank Accession: MF921324
  Last Updated: 2024-09-24 Genome: Mitochondrial
  Locus: Cytochrome Oxidase Subunit 1 5' Region
  Nucleotides: 658 bp
 
AACATTATATTTTATTTTTGGTATTTGAGCTGGAATAGTAGGAACTTCTTTAAGTTTATTAATTCGAGCTGAATT
AGGAAATCCTGGATCTTTAATTGGAGATGATCAAATTTACAATACTATTGTTACAGCACATGCTTTCATTATAAT
TTTTTTTATAGTAATACCTATTATAATTGGAGGATTTGGTAATTGACTTGTTCCATTAATATTAGGAGCTCCAGA
TATGGCATTCCCCCGAATAAATAATATAAGTTTTTGACTTCTTCCCCCCTCATTAACTCTTTTAATTTCAAGAAG
AATCGTAGAAAATGGAGCAGGAACAGGATGAACAGTGTACCCCCCACTTTCATCTAATATTGCCCATGGAGGAAG
ATCTGTAGATCTTGCTATTTTTTCTCTTCATTTAGCTGGAATTTCTTCTATTTTAGGAGCTATTAATTTTATTAC
TACAATTATTAATATACGATTAAATAGACTCTCATTTGATCAAATACCATTATTTATTTGAGCAGTAGGAATTAC
TGCATTTTTATTACTATTATCATTACCTGTATTAGCAGGAGCTATTACTATACTCTTAACTGATCGAAATTTAAA
TACTTCCTTTTTTGATCCTGCAGGAGGAGGAGACCCTATTTTATATCAACATTTATTT
  Amino Acids:  
 
TLYFIFGIWAGMVGTSLSLLIRAELGNPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMLGAPD
MAFPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFIT
TIINMRLNSLSFDQMPLFIWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLF
  Illustrative Barcode:
 
   

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  ELECTROPHEROGRAM TRACE FILES: COI-5P
  Length Pcr Primers Seq Primer Read Status Run Date  
259 LepF1 / MLepR2
LepF1
Forward high qual 2013-12-10  
265 LepF1 / MLepR2
MLepR2
Reverse high qual 2013-12-10  
373 MLepF1 / LepR1
MLepF1
Forward high qual 2013-12-10  
375 MLepF1 / LepR1
LepR1
Reverse high qual 2013-12-10  
 
Generated using the BOLD API

													
  Specimen Images:
  License:
CreativeCommons - Attribution (2013)
  License Holder:
CBG Photography Group, Centre for Biodiversity Genomics

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Collection Site:

  Attribution:
Specimen Depository: Smithsonian Institution, National Museum of Natural History
Sequencing Center:
Photography: CBG Photography Group, Centre for Biodiversity Genomics
Collectors: S.E.Crumb
Specimen Identification:
Project Manager: Scott E. Miller
Sequencing Support: International Barcode of Life (WG1.9)