Public Data Portal - Specimen Record

 
 
 
 
 
Specimen Data Sequences Combined
  Record Details For LBCS046-07     Back to Search: Records
  IDENTIFIERS:
  Sample ID: UBC-2007-0028 Museum ID:
  Field ID: UBC-2007-0028 Collection Code:
  Deposited In: Research Collection of Jeremy deWaard
 

Comments

Add a Comment

No Comment made
More...

Tags

No tags
Edit
  TAXONOMY:
  Phylum: Arthropoda Subfamily: Larentiinae
  Class: Insecta Genus: Xanthorhoe
  Order: Lepidoptera Species: Xanthorhoe defensaria
  Family: Geometridae Subspecies:
  BIN (Cluster ID): BOLD:AAA5319
  * Barcode Index Numbers(BIN): cluster barcode sequences to create OTUs that closely reflect species groupings
  SPECIMEN DETAILS:
  Voucher Status: Reproduction:
  Tissue Descriptor: Sex:
  Brief Note: Life Stage: A
  Detailed Notes: UV light
 
  COLLECTION DATA:
  Country: Canada Date Collected: 2007-05-29
  Province/State: British Columbia Collectors: Li, A.
  Region/County: Vancouver    
  Sector: Stanley Park    
  Exact Site: Hollow Tree Area    
  Latitude: 49.301 Elevation: 52 Meters
  Longitude: -123.128 Elv. Accuracy:
  Coord. Source: Depth:
  Coord. Accuracy: Depth Accuracy :
 
 

  SEQUENCE: COI-5P   [Funding Source: COMPIII]
  Sequence ID: LBCS046-07.COI-5P GenBank Accession: FJ413016
  Last Updated: 2024-05-27 Genome: Mitochondrial
  Locus: Cytochrome Oxidase Subunit 1 5' Region
  Nucleotides: 658 bp
 
AACTTTATATTTTATTTTTGGAATTTGAGCAGGAATAATTGGAACATCTTTAAGTTTATTAATTCGAGCAGAATT
AGGAAACCCAGGATCATTAATCGGAGATGATCAAATTTACAATACCATTGTCACAGCTCATGCTTTTATTATAAT
TTTCTTTATAGTAATACCTATTATAATTGGAGGATTTGGAAATTGATTAGTACCTCTAATACTAGGAGCTCCAGA
TATGGCATTTCCTCGAATAAATAATATAAGATTTTGATTACTACCCCCCTCAATTACTCTACTGATTTCAAGAAG
AATTGTAGAAAATGGAGCTGGAACTGGATGAACAGTTTACCCCCCTCTATCATCTAATATCGCACACGGTGGAAG
TTCAGTTGATTTAGCTATTTTTTCCCTTCATCTAGCTGGAATTTCTTCAATTTTAGGAGCTATTAATTTTATCAC
AACCATTATTAATATACGATTAAATAATATATTTTTTGATCAATTACCTTTATTTGTTTGAGCTGTAGGAATTAC
AGCATTTTTATTATTACTTTCTTTACCTGTTTTAGCTGGAGCTATTACTATATTATTAACAGATCGAAATTTAAA
TACATCATTTTTTGACCCTGCTGGAGGAGGAGACCCTATTCTTTACCAACATTTATTT
  Amino Acids:  
 
TLYFIFGIWAGMIGTSLSLLIRAELGNPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMLGAPD
MAFPRMNNMSFWLLPPSITLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFIT
TIINMRLNNMFFDQLPLFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLF
  Illustrative Barcode:
 
   

Comments

Add a Comment

No Comment made
More...

Tags

No tags
Edit
  ELECTROPHEROGRAM TRACE FILES: COI-5P
  Length Pcr Primers Seq Primer Read Status Run Date  
624 LepF1 / LepR1
LepR1
Reverse high qual 2008-01-02  
620 LepF1 / LepR1
LepF1
Forward high qual 2008-01-02  
 
Generated using the BOLD API

													
  Specimen Images:
  License:
CreativeCommons - Attribution (2010)
  License Holder:
Jeremy deWaard, University of British Columbia

Comments

Add a Comment

No Comment made
More...

Tags

No tags
Edit

Collection Site:

  Attribution:
Specimen Depository: Research Collection of Jeremy deWaard
Sequencing Center:
Photography: Jeremy deWaard, University of British Columbia
Collectors: Li, A.
Specimen Identification:
Project Manager: Jeremy deWaard
Sequencing Support: Canadian Barcode of Life Network