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Specimen Data Sequences Combined
  Record Details For LATPA055-12     Back to Search: Records
  IDENTIFIERS:
  Sample ID: TPA 053-12 Museum ID: TPA 053-12
  Field ID: 053-12 Collection Code:
  Deposited In: Centre for Biodiversity Genomics
 

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  TAXONOMY:
  Phylum: Arthropoda Subfamily: Polycentropodinae
  Class: Insecta Genus: Polycentropus
  Order: Trichoptera Species: Polycentropus variegatus
  Family: Polycentropodidae Subspecies:
  BIN (Cluster ID): BOLD:AAD8652
  * Barcode Index Numbers(BIN): cluster barcode sequences to create OTUs that closely reflect species groupings
  SPECIMEN DETAILS:
  Voucher Status: Reproduction: S
  Tissue Descriptor: Sex:
  Brief Note: Length 9mm|Antennae8mm Life Stage: A
  Detailed Notes:
 
  COLLECTION DATA:
  Country: Canada Date Collected: 2012-08-03
  Province/State: British Columbia Collectors: Libby Avis
  Region/County: Vancouver Island    
  Sector: Port Alberni    
  Exact Site:    
  Latitude: 49.284 Elevation:
  Longitude: -124.768 Elv. Accuracy:
  Coord. Source: GPS Depth:
  Coord. Accuracy: Depth Accuracy :
 
  PUBLICATIONS:
  Paul D. N. Hebert , Sujeevan Ratnasingham , Evgeny V. Zakharov , Angela C. Telfer , Valerie Levesque-Beaudin , Megan A. Milton , Stephanie Pedersen , Paul Jannetta and Jeremy R. deWaard Counting animal species with DNA barcodes: Canadian insects Philosophical transactions of the royal society b 2016-09-05;371(1702):0-0 (PDF)
  Zhou X et al. The Trichoptera barcode initiative: a strategy for generating a species-level Tree of Life Philosophocal Transactions of the Royal Society B 2016-08-01;371(1702):25 (PDF)
 
 

  SEQUENCE: COI-5P   [Funding Source: iBOL:WG1.7]
  Sequence ID: LATPA055-12.COI-5P GenBank Accession: KR145888
  Last Updated: 2024-04-23 Genome: Mitochondrial
  Locus: Cytochrome Oxidase Subunit 1 5' Region
  Nucleotides: 630 bp
 
AACTCTATATTTTATTTTCGGAATTTGATCAAGAATTGTAGGATCAACTTTAAGATTCATTATTCGAATTGAATT
AAGAACATCAAATTCATTAATAATAAATGATCAAATTTATAATTCAGTTGTAACCCTTCATGCTTTTATTATAAT
TTTTTTTATAATTATACCATTAATAATTGGAGGATTTGGAAATTGATTAATTCCTTTAATATTAATAACTCCAGA
TATAGCATTTCCTCGAATAAATAATATAAGATTTTGATTATTACCTCCTTCAATTTTTTTCTTAATTTCTGGAAT
TTTCATAGATAATAGAGTAGGAACAGGATGAACAGTCTATCCTCCATTATCAAATAATATTTTTCATTCTGGTAA
AGCAGTAGATATCTCAATTTTTTCTTTACACATAGCAGGGATTTCTTCAATTTTAGGAGCAATTAATTTTATTTC
CACTATTATAAATATAAAATTAAAAAATATCTCAATAAATATAATTCCTTTATTCATTTGATCCATTAAAATTAC
AGCTATTTTACTTCTATTATCTCTTCCAGTATTAGCAGGAGCTATTACTATACTTTTAACTGATCGAAACCTTAA
TACCTCATTTTTTGACCCATCAGGAGGGGG
  Amino Acids:  
 
TLYFIFGIWSSIVGSTLSFIIRIELSTSNSLMMNDQIYNSVVTLHAFIMIFFMIMPLMIGGFGNWLIPLMLMTPD
MAFPRMNNMSFWLLPPSIFFLISGIFMDNSVGTGWTVYPPLSNNIFHSGKAVDISIFSLHMAGISSILGAINFIS
TIMNMKLKNISMNMIPLFIWSIKITAILLLLSLPVLAGAITMLLTDRNLNTSFFDPSGGX
  Illustrative Barcode:
 
   

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  ELECTROPHEROGRAM TRACE FILES: COI-5P
  Length Pcr Primers Seq Primer Read Status Run Date  
624 C_LepFolF / C_LepFolR
C_LepFolR
Reverse high qual 2013-01-09  
 
Generated using the BOLD API

													
  Specimen Images:
  License:
CreativeCommons - Attribution (2012)
  License Holder:
Libby Avis, Centre for Biodiversity Genomics

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Collection Site:

  Attribution:
Specimen Depository: Centre for Biodiversity Genomics
Sequencing Center:
Photography: Libby Avis, Centre for Biodiversity Genomics
Collectors: Libby Avis
Specimen Identification:
Project Manager: CBG Project Management Team
Sequencing Support: International Barcode of Life (WG1.7)