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Specimen Data Sequences Combined
  Record Details For LATPA014-12     Back to Search: Records
  IDENTIFIERS:
  Sample ID: TPA 012-12 Museum ID: TPA 012-12
  Field ID: 012-12 Collection Code:
  Deposited In: Centre for Biodiversity Genomics
 

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  TAXONOMY:
  Phylum: Arthropoda Subfamily:
  Class: Insecta Genus: Rhyacophila
  Order: Trichoptera Species: Rhyacophila angelita
  Family: Rhyacophilidae Subspecies:
  BIN (Cluster ID):
  * Barcode Index Numbers(BIN): cluster barcode sequences to create OTUs that closely reflect species groupings
  SPECIMEN DETAILS:
  Voucher Status: Reproduction: S
  Tissue Descriptor: Sex:
  Brief Note: Length 10mm|Antennaemm Life Stage: A
  Detailed Notes:
 
  COLLECTION DATA:
  Country: Canada Date Collected: 2012-07-08
  Province/State: British Columbia Collectors: Libby Avis
  Region/County: Vancouver Island    
  Sector: Port Alberni    
  Exact Site:    
  Latitude: 49.284 Elevation:
  Longitude: -124.768 Elv. Accuracy:
  Coord. Source: GPS Depth:
  Coord. Accuracy: Depth Accuracy :
 
 

  SEQUENCE: COI-5P   [Funding Source: N/A]
  Sequence ID: LATPA014-12.COI-5P GenBank Accession: MG376800
  Last Updated: 2024-04-30 Genome: Mitochondrial
  Locus: Cytochrome Oxidase Subunit 1 5' Region
  Nucleotides: 502 bp
 
GACTATATATTTTATTTTTGGAATTTGAGCAGGAATAGTTGGCTCATCTTTAAGAATAATTATTCGAACAGAGTT
AGGAATACCAGGCTCTTTAATCGGAAATGATCAAATTTTTAACGTAATTGTTACAGCTCATGCATTTATTATAAT
TTTTTTTATAGTAATACCAATTATAATCGGAGGGTTCGGAAACTGACTTGTACCCCTTATACTGGGTGCCCCAGA
TATGGCATTCCCTCGAATAAATAACATAAGATTTTGACTACTTCCCCCATCCCTTTCCCTACTTACTATAAGAAG
AATTGTAGAAAATGGAGCAGGCACTGGTTGAACTGTTTATCCCCCCCTATCCTCAAATATCGGACACGCTGGCAG
ATCGGTAGATTTAACTATTTTCTCCCTTCATCTTGCAGGAATTTCTTCAATTTTAGGGGCTATCAATTTTATCAC
AACAGTGATTAATATACGTTCAAAGGGAATATCACTAGATCAAATACCCTTA
  Amino Acids:  
 
TMYFIFGIWAGMVGSSLSMIIRTELGMPGSLIGNDQIFNVIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMLGAPD
MAFPRMNNMSFWLLPPSLSLLTMSSIVENGAGTGWTVYPPLSSNIGHAGSSVDLTIFSLHLAGISSILGAINFIT
TVINMRSKGMSLDQMPL
  Illustrative Barcode:
 
   

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  ELECTROPHEROGRAM TRACE FILES: COI-5P
  Length Pcr Primers Seq Primer Read Status Run Date  
559 C_LepFolF / C_LepFolR
C_LepFolR
Reverse high qual 2013-01-09  
 
Generated using the BOLD API

													
  Specimen Images:
  License:
CreativeCommons - Attribution (2012)
  License Holder:
Libby Avis, Centre for Biodiversity Genomics

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Collection Site:

  Attribution:
Specimen Depository: Centre for Biodiversity Genomics
Sequencing Center:
Photography: Libby Avis, Centre for Biodiversity Genomics
Collectors: Libby Avis
Specimen Identification:
Project Manager: CBG Project Management Team
Sequencing Support: