Public Data Portal - Specimen Record

 
 
 
 
 
Specimen Data Sequences Combined
  Record Details For LALPA813-10     Back to Search: Records
  IDENTIFIERS:
  Sample ID: AVBC 815-10 Museum ID: AVBC 815-10
  Field ID: AVBC 815-10 Collection Code:
  Deposited In: Centre for Biodiversity Genomics
 

Comments

Add a Comment

No Comment made
More...

Tags

No tags
Edit
  TAXONOMY:
  Phylum: Arthropoda Subfamily: Noctuinae
  Class: Insecta Genus: Pseudobryomima
  Order: Lepidoptera Species: Pseudobryomima muscosa
  Family: Noctuidae Subspecies:
  BIN (Cluster ID): BOLD:AAD7262
  * Barcode Index Numbers(BIN): cluster barcode sequences to create OTUs that closely reflect species groupings
  SPECIMEN DETAILS:
  Voucher Status: Reproduction: S
  Tissue Descriptor: Sex:
  Brief Note: 12mm Life Stage: A
  Detailed Notes:
 
  COLLECTION DATA:
  Country: Canada Date Collected: 2010-10-07
  Province/State: British Columbia Collectors: R.Avis, L.Avis
  Region/County: Vancouver Island    
  Sector: Pemberton    
  Exact Site:    
  Latitude: 50.3167 Elevation: 200 Meters
  Longitude: -122.8 Elv. Accuracy:
  Coord. Source: Depth:
  Coord. Accuracy: Depth Accuracy :
 
  PUBLICATIONS:
  Zahiri, Reza; Lafontaine, J. Donald; Schmidt, B. Christian; deWaard, Jeremy R.; Zakharov, Evgeny V.; Hebert, Paul D. N. A Transcontinental Challenge — A Test of DNA Barcode Performance for 1,541 Species of Canadian Noctuoidea (Lepidoptera) PLoS ONE ;9(3):e92797 (PDF)
  Reza Zahiri, J. Donald Lafontaine, B. Christian Schmidt, Jeremy R. deWaard, Evgeny V. Zakharov, Paul D. N. Hebert Probing planetary biodiversity with DNA barcodes: The Noctuoidea of North America PLoS ONE 2017-06-01;12(6):0-0 (PDF)
  Paul D. N. Hebert , Sujeevan Ratnasingham , Evgeny V. Zakharov , Angela C. Telfer , Valerie Levesque-Beaudin , Megan A. Milton , Stephanie Pedersen , Paul Jannetta and Jeremy R. deWaard Counting animal species with DNA barcodes: Canadian insects Philosophical transactions of the royal society b 2016-09-05;371(1702):0-0 (PDF)
 
 

  SEQUENCE: COI-5P   [Funding Source: iBOL:WG1.9]
  Sequence ID: LALPA813-10.COI-5P GenBank Accession: JF853236
  Last Updated: 2024-09-24 Genome: Mitochondrial
  Locus: Cytochrome Oxidase Subunit 1 5' Region
  Nucleotides: 658 bp
 
AACATTATATTTTATTTTTGGAATTTGAGCAGGAATAGTAGGAACTTCTTTAAGATTACTAATTCGAGCTGAATT
AGGAACCCCAGGATCTTTAATTGGAGATGATCAAATTTATAATACTATTGTCACAGCTCATGCTTTCATTATAAT
TTTTTTTATAGTTATACCTATTATAATTGGAGGATTTGGTAATTGACTTGTACCTCTAATACTAGGAGCTCCTGA
TATAGCATTTCCTCGAATAAATAATATAAGTTTTTGACTTCTTCCCCCCTCTTTAACTTTATTAATTTCAAGTAG
AATTGTAGAAAATGGAGCAGGAACAGGATGAACAGTTTACCCCCCACTTTCATCTAATATTGCTCATGGAGGAAG
ATCTGTAGATTTAGCTATTTTTTCCCTTCATTTAGCAGGTATTTCTTCAATTTTAGGAGCAATTAACTTTATTAC
TACAATTATTAATATACGATTAAATAGATTATCATTTGATCAAATACCTCTATTTATTTGAGCCGTAGGAATTAC
AGCATTTTTATTATTATTATCATTACCCGTTTTAGCTGGAGCTATTACTATACTTTTAACTGATCGAAATTTAAA
TACATCTTTTTTTGATCCAGCTGGAGGAGGAGATCCAATTTTATATCAACATTTATTT
  Amino Acids:  
 
TLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMLGAPD
MAFPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFIT
TIINMRLNSLSFDQMPLFIWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLF
  Illustrative Barcode:
 
   

Comments

Add a Comment

No Comment made
More...

Tags

No tags
Edit
  ELECTROPHEROGRAM TRACE FILES: COI-5P
  Length Pcr Primers Seq Primer Read Status Run Date  
628 LepF1 / LepR1
LepR1
Reverse high qual 2011-03-01  
641 LepF1 / LepR1
LepF1
Forward high qual 2011-03-01  
 
Generated using the BOLD API

													
  Specimen Images:
  License:
CreativeCommons - Attribution (2010)
  License Holder:
CBG Photography Group, Centre for Biodiversity Genomics

Comments

Add a Comment

No Comment made
More...

Tags

No tags
Edit

Collection Site:

  Attribution:
Specimen Depository: Centre for Biodiversity Genomics
Sequencing Center:
Photography: Libby Avis, Centre for Biodiversity Genomics
Collectors: R.Avis, L.Avis
Specimen Identification: Libby Avis
Project Manager: CBG Project Management Team
Sequencing Support: International Barcode of Life (WG1.9)