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Specimen Data Sequences Combined
  Record Details For LALPA456-10     Back to Search: Records
  IDENTIFIERS:
  Sample ID: AVBC 458-10 Museum ID: AVBC 458-10
  Field ID: AVBC 458-10 Collection Code:
  Deposited In: Centre for Biodiversity Genomics
 

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  TAXONOMY:
  Phylum: Arthropoda Subfamily: Tortricinae
  Class: Insecta Genus: Choristoneura
  Order: Lepidoptera Species: Choristoneura fumiferana
  Family: Tortricidae Subspecies:
  BIN (Cluster ID): BOLD:ABX5883
  * Barcode Index Numbers(BIN): cluster barcode sequences to create OTUs that closely reflect species groupings
  SPECIMEN DETAILS:
  Voucher Status: Reproduction: S
  Tissue Descriptor: Sex:
  Brief Note: 12mm Life Stage: A
  Detailed Notes: Choristoneura type
 
  COLLECTION DATA:
  Country: Canada Date Collected: 2010-07-27
  Province/State: British Columbia Collectors: R.Avis, L.Avis
  Region/County: Vancouver Island    
  Sector: Port Alberni    
  Exact Site:    
  Latitude: 49.3 Elevation: 100 Meters
  Longitude: -124.78 Elv. Accuracy:
  Coord. Source: Depth:
  Coord. Accuracy: Depth Accuracy :
 
  PUBLICATIONS:
  Paul D. N. Hebert , Sujeevan Ratnasingham , Evgeny V. Zakharov , Angela C. Telfer , Valerie Levesque-Beaudin , Megan A. Milton , Stephanie Pedersen , Paul Jannetta and Jeremy R. deWaard Counting animal species with DNA barcodes: Canadian insects Philosophical transactions of the royal society b 2016-09-05;371(1702):0-0 (PDF)
 
 

  SEQUENCE: COI-5P   [Funding Source: iBOL:WG1.9]
  Sequence ID: LALPA456-10.COI-5P GenBank Accession: JF852891
  Last Updated: 2024-09-24 Genome: Mitochondrial
  Locus: Cytochrome Oxidase Subunit 1 5' Region
  Nucleotides: 658 bp
 
AACATTATATTTTATATTTGGAATTTGAGCAGGTATAGTAGGAACATCTTTAAGATTATTAATTCGAGCTGAATT
AGGAAATCCTGGATCTTTAATTGGTGATGATCAAATTTATAATACTATTGTAACAGCTCATGCTTTTATTATAAT
TTTTTTTATAGTTATACCTATTATAATTGGAGGATTTGGAAATTGATTAGTTCCTTTAATATTGGGAGCTCCAGA
TATAGCTTTTCCCCGTATAAATAATATAAGATTTTGACTTTTACCCCCCTCTATTATACTTTTAATTTCAAGAAG
AATCGTAGAAAATGGAGCTGGTACAGGATGAACAGTATACCCCCCACTTTCATCTAATATTGCTCATAGAGGAAG
ATCAGTAGATTTAGCAATTTTTTCCTTACATTTAGCAGGAATTTCATCTATTTTAGGAGCTGTAAATTTTATTAC
AACTATTATTAATATACGACCAAATAATATATCTTTAGATCAAATACCCTTATTTGTATGATCGGTAGGAATTAC
AGCTCTTTTACTTCTTTTATCTTTACCTGTATTAGCTGGAGCTATTACTATATTATTAACAGATCGAAATTTAAA
CACATCATTTTTTGATCCTGCTGGCGGAGGAGATCCTATTTTATATCAACATTTATTT
  Amino Acids:  
 
TLYFMFGIWAGMVGTSLSLLIRAELGNPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMLGAPD
MAFPRMNNMSFWLLPPSIMLLISSSIVENGAGTGWTVYPPLSSNIAHSGSSVDLAIFSLHLAGISSILGAVNFIT
TIINMRPNNMSLDQMPLFVWSVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLF
  Illustrative Barcode:
 
   

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  ELECTROPHEROGRAM TRACE FILES: COI-5P
  Length Pcr Primers Seq Primer Read Status Run Date  
633 LepF1 / LepR1
LepR1
Reverse high qual 2011-02-10  
636 LepF1 / LepR1
LepF1
Forward high qual 2011-02-10  
 
Generated using the BOLD API

													
  Specimen Images:
  License:
CreativeCommons - Attribution (2010)
  License Holder:
CBG Photography Group, Centre for Biodiversity Genomics

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Collection Site:

  Attribution:
Specimen Depository: Centre for Biodiversity Genomics
Sequencing Center:
Photography: Libby Avis, Centre for Biodiversity Genomics
Collectors: R.Avis, L.Avis
Specimen Identification: Libby Avis
Project Manager: CBG Project Management Team
Sequencing Support: International Barcode of Life (WG1.9)