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Specimen Data Sequences Combined
  Record Details For JWDCA440-10     Back to Search: Records
  IDENTIFIERS:
  Sample ID: 07PROBE-JW0440 Museum ID:
  Field ID: E#CHMAL-007 Collection Code:
  Deposited In: Centre for Biodiversity Genomics
 

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  TAXONOMY:
  Phylum: Arthropoda Subfamily: Coenosiinae
  Class: Insecta Genus: Spilogona
  Order: Diptera Species:
  Family: Muscidae Subspecies:
  BIN (Cluster ID): BOLD:AAB5278
  * Barcode Index Numbers(BIN): cluster barcode sequences to create OTUs that closely reflect species groupings
  SPECIMEN DETAILS:
  Voucher Status: Reproduction:
  Tissue Descriptor: Sex:
  Brief Note: Life Stage: A
  Detailed Notes: ::taxonomy:DNA Barcode Identification::endTaxonomy:malaise trap
 
  COLLECTION DATA:
  Country: Canada Date Collected: 2007-07-21
  Province/State: Manitoba Collectors: A. Renaud
  Region/County: Churchill    
  Sector: 23 km E Churchill, Ramsay Creek    
  Exact Site:    
  Latitude: 58.7306 Elevation: 10 Meters
  Longitude: -93.7804 Elv. Accuracy:
  Coord. Source: GPS WGS84 Depth:
  Coord. Accuracy: Depth Accuracy :
 
  PUBLICATIONS:
  Paul D. N. Hebert , Sujeevan Ratnasingham , Evgeny V. Zakharov , Angela C. Telfer , Valerie Levesque-Beaudin , Megan A. Milton , Stephanie Pedersen , Paul Jannetta and Jeremy R. deWaard Counting animal species with DNA barcodes: Canadian insects Philosophical transactions of the royal society b 2016-09-05;371(1702):0-0 (PDF)
 
 

  SEQUENCE: COI-5P   [Funding Source: iBOL:WG1.10]
  Sequence ID: JWDCA440-10.COI-5P GenBank Accession: HQ961973
  Last Updated: 2024-09-24 Genome: Mitochondrial
  Locus: Cytochrome Oxidase Subunit 1 5' Region
  Nucleotides: 658 bp
 
AACTTTATATTTTATTTTCGGAGCTTGATCTGGAATAATTTGAACCTCATTAAGTATTTTAATTCGAGCTGAATT
AGGACATCCTGGTGCTTTAATTGGTAATGATCAAATTTATAATGTAATTGTAACTGCACATGCTTTTATTATAAT
TTTCTTTATAGTTATACCTATTATAATTGGAGGATTTGGAAACTGACTAGTACCATTAATGCTAGGAGCCCCTGA
TATAGCATTTCCTCGAATAAATAATATAAGTTTTTGACTTTTACCTCCAGCTCTAATTTTATTACTAACAAGTAG
TATAGTAGAAAATGGAGCTGGAACTGGATGAACTGTTTATCCTCCTTTATCATCTAATATCGCTCATGGAGGAGC
TTCTGTAGATTTAGCTATTTTCTCTTTACATTTAGCTGGAATTTCTTCTATTTTAGGAGCTGTAAATTTTATTAC
AACTGTAATTAATATACGATCAACAGGAATTACCTTTGACCGAATACCTTTATTTGTTTGATCAGTGGTTATTAC
AGCTTTATTATTACTTTTATCATTACCTGTATTAGCAGGAGCTATTACTATATTATTAACAGATCGAAATTTAAA
TACTTCATTTTTTGACCCAGCAGGAGGAGGAGATCCAATTTTATATCAACATCTATTT
  Amino Acids:  
 
TLYFIFGAWSGMIWTSLSILIRAELGHPGALIGNDQIYNVIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMLGAPD
MAFPRMNNMSFWLLPPALILLLTSSMVENGAGTGWTVYPPLSSNIAHGGASVDLAIFSLHLAGISSILGAVNFIT
TVINMRSTGITFDRMPLFVWSVVITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLF
  Illustrative Barcode:
 
   

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  ELECTROPHEROGRAM TRACE FILES: COI-5P
  Length Pcr Primers Seq Primer Read Status Run Date  
640 LepF1 / LepR1
LepR1
Reverse high qual 2010-08-16  
613 LepF1 / LepR1
LepF1
Forward high qual 2010-08-15  
 
Generated using the BOLD API

													
  Specimen Images:
  License:
CreativeCommons - Attribution (2010)
  License Holder:
CBG Photography Group, Centre for Biodiversity Genomics

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Collection Site:

  Attribution:
Specimen Depository: Centre for Biodiversity Genomics
Sequencing Center:
Photography: Jinjing Wang, Centre for Biodiversity Genomics
Collectors: A. Renaud
Specimen Identification: Valerie Levesque-Beaudin
Project Manager: CBG Project Management Team
Sequencing Support: International Barcode of Life (WG1.10)