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Specimen Data Sequences Combined
  Record Details For JMMMB607-13     Back to Search: Records
  IDENTIFIERS:
  Sample ID: BIOUG06722-F09 Museum ID: BIOUG06722-F09
  Field ID: JMCA-0609 Collection Code:
  Deposited In: Centre for Biodiversity Genomics
 

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  TAXONOMY:
  Phylum: Arthropoda Subfamily: Noctuinae
  Class: Insecta Genus: Euxoa
  Order: Lepidoptera Species: Euxoa plagigera
  Family: Noctuidae Subspecies:
  BIN (Cluster ID): BOLD:ACF2029
  * Barcode Index Numbers(BIN): cluster barcode sequences to create OTUs that closely reflect species groupings
  SPECIMEN DETAILS:
  Voucher Status: Reproduction: S
  Tissue Descriptor: Sex:
  Brief Note: Life Stage: A
  Detailed Notes: Caught by an outdoor night light
 
  COLLECTION DATA:
  Country: United States Date Collected: 2012-08-14
  Province/State: California Collectors: Jim Moore
  Region/County: Lassen    
  Sector:    
  Exact Site: In Westwood    
  Latitude: 40.3036 Elevation: 1555 Meters
  Longitude: -121.009 Elv. Accuracy:
  Coord. Source: Depth:
  Coord. Accuracy: Depth Accuracy :
 
  PUBLICATIONS:
  Reza Zahiri, J. Donald Lafontaine, B. Christian Schmidt, Jeremy R. deWaard, Evgeny V. Zakharov, Paul D. N. Hebert Probing planetary biodiversity with DNA barcodes: The Noctuoidea of North America PLoS ONE 2017-06-01;12(6):0-0 (PDF)
 
 

  SEQUENCE: COI-5P   [Funding Source: iBOL:WG1.9]
  Sequence ID: JMMMB607-13.COI-5P GenBank Accession: MF920702
  Last Updated: 2024-04-23 Genome: Mitochondrial
  Locus: Cytochrome Oxidase Subunit 1 5' Region
  Nucleotides: 597 bp
 
ACATTATATTTTATTTTTGGTATTTGAGCAGGAATAGTTGGAACTTCTTTA---AGATTATTAATTCGAGCTGAA
TTAGGAAATCCTGGATCTTTAATTGGAGAT---GATCAAATTTATAATACAATTGTTACAGCTCATGCTTTTATT
ATAATTTTTTTTATAGTTATACCTATTATAATTGGAGGATTTGGTAATTGATTAGTTCCTTTAATA---TTAGGA
GCTCCAGATATAGCATTTCCTCGAATAAATAATATAAGTTTTTGACTTCTCCCCCCCTCATTAACATTACTTATT
TCAAGAAGAATTGTAGAAAATGGGGCAGGAACAGGATGAACAGTGTACCCCCCACTCTCATCTAATATTGCCCAT
GGAGGAAGATCTGTAGATCTT---GCTATTTTTTCTTTACATTTAGCTGGAATTTCATCTATTTTAGGAGCTATT
AATTTTATTACTACAATTATTAATATACGATTAAATAATTTATCTTTTGATCAAATACCTTTATTTATTTGAGCT
GTAGGAATTACTGCATTTTTATTACTATTATCTTTACCTGTTTTAGCTGGA---GCTATTACAATACTTCTA
  Amino Acids:  
 
TLYFIFGIWAGMVGTSL-SLLIRAELGNPGSLIGD-DQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLVPLM-LG
APDMAFPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDL-AIFSLHLAGISSILGAI
NFITTIINMRLNNLSFDQMPLFIWAVGITAFLLLLSLPVLAG-AITMLL
  Illustrative Barcode:
 
   

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  ELECTROPHEROGRAM TRACE FILES: COI-5P
  Length Pcr Primers Seq Primer Read Status Run Date  
613 LepF1 / LepR1
LepR1
Reverse high qual 2013-10-04  
 
Generated using the BOLD API

													
  Specimen Images:
  License:
CreativeCommons - Attribution (2012)
  License Holder:
CBG Photography Group, Centre for Biodiversity Genomics

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  License:
CreativeCommons - Attribution (2012)
  License Holder:
CBG Photography Group, Centre for Biodiversity Genomics

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  License:
CreativeCommons - Attribution (2012)
  License Holder:
CBG Photography Group, Centre for Biodiversity Genomics

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Collection Site:

  Attribution:
Specimen Depository: Centre for Biodiversity Genomics
Sequencing Center:
Photography: Jim Moore, Centre for Biodiversity Genomics
Collectors: Jim Moore
Specimen Identification: Jim M. Moore
Project Manager: Jim M. Moore
Sequencing Support: International Barcode of Life (WG1.9)