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Specimen Data Sequences Combined
  Record Details For HPPPD1171-13     Back to Search: Records
  IDENTIFIERS:
  Sample ID: BIOUG07277-A09 Museum ID: BIOUG07277-A09
  Field ID: GMP#01736 Collection Code:
  Deposited In: Centre for Biodiversity Genomics
 

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  TAXONOMY:
  Phylum: Arthropoda Subfamily: Idolothripinae
  Class: Insecta Genus: Bactrothrips
  Order: Thysanoptera Species:
  Family: Phlaeothripidae Subspecies:
  BIN (Cluster ID):
  * Barcode Index Numbers(BIN): cluster barcode sequences to create OTUs that closely reflect species groupings
  SPECIMEN DETAILS:
  Voucher Status: Vouchered:Registered Collection Reproduction:
  Tissue Descriptor: Sex:
  Brief Note: Life Stage:
  Detailed Notes: Date range on label was Jun 22-29 but believe it to be mislabeled
 
  COLLECTION DATA:
  Country: Canada Date Collected: 2013-07-06
  Province/State: Nova Scotia Collectors: Tyler Zemlak
  Region/County: Halifax    
  Sector: Point Pleasant Park    
  Exact Site:    
  Latitude: 44.623 Elevation: 30 Meters
  Longitude: -63.569 Elv. Accuracy:
  Coord. Source: Depth:
  Coord. Accuracy: Depth Accuracy :
 
 

  SEQUENCE: COI-5P   [Funding Source: N/A]
  Sequence ID: HPPPD1171-13.COI-5P GenBank Accession: MG364149
  Last Updated: 2024-09-24 Genome: Mitochondrial
  Locus: Cytochrome Oxidase Subunit 1 5' Region
  Nucleotides: 548 bp
 
TATAATATATTTCCTTTTTGGATTTTGATCTGGTGTTTGTGGTTTATTTATAAGTTTTATTATCCGTTTAGAATT
ATCTCAACCA---GGACAAACATTTTTAAAT---CCTCATACTTATAATGTTATAGTAACTAATCATGCTTTTAT
AATAATTTTTTTTACTATTATACCTATTATAATAGGAGGTTTTGGTAATTGATTAGTACCTATTATATTAAATAG
ACCTGATATATGTTATCCTCGAATAAATAATATAAGATTTTGACTTTTACCCCCTTCTTTATTTTTACTTTTATT
AAGTATATTCTTAGAAGGGGGTTCAGGAACTGGTTGAACTATTTATCCCCCTCTTTCTACTTTATCA------AT
AGGTATTTCTATAGATATAGTTATTATTTCACTTCATATTGCAGGTGCTTCTTCACTTTTAGGTTCAATTAATTT
TATTGCAACTATTTTTAATATATCTTTT---ATTAATTTAGAATTT------ATTCCTCTTTTTGTATGATCTAT
TTTGGTAACTTCTTTTTTACTTT
  Amino Acids:  
 
MMYFLFGFWSGVCGLFMSFIIRLELSQP-GQTFLN-PHTYNVMVTNHAFMMIFFTIMPIMMGGFGNWLVPIMLNS
PDMCYPRMNNMSFWLLPPSLFLLLLSMFLEGGSGTGWTIYPPLSTLS--MGISMDMVIISLHIAGASSLLGSINF
IATIFNMSF-INLEF--IPLFVWSILVTSFLLX
  Illustrative Barcode:
 
   

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  ELECTROPHEROGRAM TRACE FILES: COI-5P
  Length Pcr Primers Seq Primer Read Status Run Date  
595 C_LepFolF / C_LepFolR
C_LepFolR
Reverse high qual 2013-08-21  
 
Generated using the BOLD API

													
  Specimen Images: N/A
Collection Site:

  Attribution:
Specimen Depository: Centre for Biodiversity Genomics
Sequencing Center:
Photography:
Collectors: Tyler Zemlak
Specimen Identification: Paul D.N. Hebert
Project Manager: CBG Project Management Team
Sequencing Support: