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Specimen Data Sequences Combined
  Record Details For HLPNM141-22     Back to Search: Records
  IDENTIFIERS:
  Sample ID: BOLD_GERPH_CA212 Museum ID: Coleccion GERPH Grupo de Estudio Relacion Parasito Hospedero
  Field ID: CA212 Collection Code:
  Deposited In: Universidad Nacional de Colombia
 

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  TAXONOMY:
  Phylum: Apicomplexa Subfamily:
  Class: Aconoidasida Genus: Plasmodium
  Order: Haemosporida Species:
  Family: Plasmodiidae Subspecies:
  BIN (Cluster ID):
  * Barcode Index Numbers(BIN): cluster barcode sequences to create OTUs that closely reflect species groupings
  SPECIMEN DETAILS:
  Voucher Status: Reproduction: S
  Tissue Descriptor: Blood Sex:
  Brief Note: Life Stage: Gametocyte/Trophozoite/Schizont
  Detailed Notes:
 
  COLLECTION DATA:
  Country: Colombia Date Collected: 2021-03-20
  Province/State: Casanare Collectors: Grupo GERPH
  Region/County: Trinidad    
  Sector: Vereda el Pozo petrolero, Finca Matepalma    
  Exact Site:    
  Latitude: 5.50193 Elevation: 175 Meters
  Longitude: -71.7625 Elv. Accuracy:
  Coord. Source: Depth:
  Coord. Accuracy: Depth Accuracy :
 
 

  SEQUENCE: CYTB   [Funding Source: N/A]
  Sequence ID: HLPNM141-22.CYTB GenBank Accession:
  Last Updated: 2024-09-24 Genome: Mitochondrial
  Locus:
  Nucleotides: 478 bp
 
CAACTGGTGCTTCATTTGTATTTATTTTAACTTATCTACATATTTTAAGAGGTCTAAATTATTCTTATTCATATT
TACCTTTATCATGGATTTCAGGATTAGTTATATTTTTAATATCTATAGTAACTGCTTTTATGGGATATGTATTAC
CTTGGGGTCAAATGAGTTTTTGGGGAGCAACTGTAATTACTAATTTATTATATTTTATCCCTGGACTTGTTTCAT
GGATTTGTGGTGGATATCTTGTTAGTGATCCAACACTAAAAAGATTTTTTGTATTACATTTTACATTTCCATTTA
TAGCTTTATGTATTGTATTTATACACATATTCTTCTTACATTTACAAGGTAGCACAAATCCTTTAGGGTATGATA
CAGCTTTAAAAATACCCTTCTATCCAAATCTATTAAGTCTCGATATTAAAGGATTTAATAATGTATTAGTACTAT
TTTTAGCACAAAGCTTATTTGGAATTTT
  Amino Acids:  
 
TGASFVFILTYLHILRGLNYSYSYLPLSWISGLVIFLISIVTAFMGYVLPWGQMSFWGATVITNLLYFIPGLVSW
ICGGYLVSDPTLKRFFVLHFTFPFIALCIVFIHIFFLHLQGSTNPLGYDTALKIPFYPNLLSLDIKGFNNVLVLF
LAQSLFGIX
  Illustrative Barcode:
 
   

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  ELECTROPHEROGRAM TRACE FILES: CYTB
  Length Pcr Primers Seq Primer Read Status Run Date  
453 HAEMF / HAEMR2
Forward high qual 2021-09-14  
 
Generated using the BOLD API

													
  Specimen Images:
  License:
CreativeCommons – Attribution Non-Commercial (by-nc) (2022)
  License Holder:
GERPH

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  License:
CreativeCommons – Attribution Non-Commercial (by-nc) (2022)
  License Holder:
GERPH

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  License:
CreativeCommons – Attribution Non-Commercial (by-nc) (2022)
  License Holder:
GERPH

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Collection Site:

  Attribution:
Specimen Depository: Universidad Nacional de Colombia
Sequencing Center:
Photography: , GERPH
Collectors: Grupo GERPH
Specimen Identification: Natalia Basto
Project Manager: Nubia E. Matta
Sequencing Support: