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Specimen Data Sequences Combined
  Record Details For EQCS044-08     Back to Search: Records
  IDENTIFIERS:
  Sample ID: HLC-23972 Museum ID:
  Field ID: HLC-23972 Collection Code:
  Deposited In: Centre for Biodiversity Genomics
 

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  TAXONOMY:
  Phylum: Echinodermata Subfamily: Ophiurinae
  Class: Ophiuroidea Genus: Ophiura
  Order: Ophiurida Species: Ophiura sarsii
  Family: Ophiuridae Subspecies:
  BIN (Cluster ID): BOLD:AAD3481
  * Barcode Index Numbers(BIN): cluster barcode sequences to create OTUs that closely reflect species groupings
  SPECIMEN DETAILS:
  Voucher Status: Reproduction:
  Tissue Descriptor: Sex:
  Brief Note: Life Stage:
  Detailed Notes:
 
  COLLECTION DATA:
  Country: Canada Date Collected: 2002-05-08
  Province/State: British Columbia Collectors: Ricker 2002
  Region/County: Queen Charlotte Sound    
  Sector:    
  Exact Site:    
  Latitude: 51.367 Elevation:
  Longitude: -128.618 Elv. Accuracy:
  Coord. Source: Depth: 199 Meters
  Coord. Accuracy: Depth Accuracy :
 
  PUBLICATIONS:
  Kara K. S. Layton, Erin A. Corstorphine and Paul D. N. Hebert Exploring Canadian Echinoderm Diversity through DNA Barcodes PLoS ONE 2016-11-21;11(11):0-0
 
 

  SEQUENCE: COI-5P   [Funding Source: iBOL:WG1.8]
  Sequence ID: EQCS044-08.COI-5P GenBank Accession: GU670192
  Last Updated: 2024-05-07 Genome: Mitochondrial
  Locus: Cytochrome Oxidase Subunit 1 5' Region
  Nucleotides: 656 bp
 
GACCCTATATTTAATATTTGGTGCTTGAGCTGGAACTGTTGGAACGGCTATGAGAAACATAATTCGAGTTGAGTT
GTCACAGCCAGGATCCCTGATACAAAAAGATCAAACGTATAACGTAATAGTGACGGCACACGCCTTTATAATGAT
TTTTTTTATGGTGATGCCTATAATGATAGGAGGATTTGGTAACTGATTAGTTCCGCTTATGATCGGAGCACCAGA
CATGGCTTTTCCCCGGATGAAAAAAATGAGATTTTGGTTAATACCCCCTTCTTTTTTATTATTAGTAGCTTCTGC
AGGAAAAGAGAGCGGTGTAGGAACAGGGTGAACGGTCTATCCCCCATTATCCGGACCAGTTGCTCACGCTGGTGG
CTGTGTAGATTTAGCTATATTTTCTCTTCACCTAGCTGGTGCTTCATCAATAATGGCATCAATTAACTTTATTAC
TACTATTATTAATATGCGAGCGCCAGGAATGACAATGGATCGAACTCCTTTATTTGTTTGGTCCATTCTAATTAC
AACATTTCTTTTGCTACTCTCATTGCCTGTTTTAGCCGGAGCTATTACTATGTTATTAACAGACCGGAAAATTAA
AACATCTTTCTTCGACCCAACAGGAGGAGGTGACCCTATTTTATTTCAACACCTAT
  Amino Acids:  
 
TLYLIFGAWAGTVGTAMSNIIRVELSQPGSLIQNDQTYNVIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMIGAPD
MAFPRMNNMSFWLIPPSFLLLVASAGNESGVGTGWTVYPPLSGPVAHAGGCVDLAIFSLHLAGASSIMASINFIT
TIINMRAPGMTMDRTPLFVWSILITTFLLLLSLPVLAGAITMLLTDRNINTSFFDPTGGGDPILFQHLX
  Illustrative Barcode:
 
   

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  ELECTROPHEROGRAM TRACE FILES: COI-5P
  Length Pcr Primers Seq Primer Read Status Run Date  
591 LCOech1aF1 / HCO2198
HCO2198
Reverse high qual 2009-07-04  
519 LCOech1aF1 / HCO2198
LCOech1aF1
Forward med qual 2009-07-04  
560 LCOech1aF1 / HCO2198
HCO2198
Reverse high qual 2009-04-01  
 
Generated using the BOLD API

													
  Specimen Images:
  License:
CreativeCommons - Attribution (2012)
  License Holder:
CBG Photography Group, Centre for Biodiversity Genomics

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Collection Site:

  Attribution:
Specimen Depository: Centre for Biodiversity Genomics
Sequencing Center:
Photography: CBG Photography Group, Centre for Biodiversity Genomics
Collectors: Ricker 2002
Specimen Identification: Erin Corstorphine
Project Manager: CBG Project Management Team
Sequencing Support: International Barcode of Life (WG1.8)