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Specimen Data Sequences Combined
  Record Details For CSBMP028-10     Back to Search: Records
  IDENTIFIERS:
  Sample ID: 10AVB-PAR0028 Museum ID:
  Field ID: 10AVB-PAR0028 Collection Code:
  Deposited In: Centre for Biodiversity Genomics
 

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  TAXONOMY:
  Phylum: Arthropoda Subfamily: Rhadinopsyllinae
  Class: Insecta Genus: Nearctopsylla
  Order: Siphonaptera Species: Nearctopsylla brooksi
  Family: Ctenophthalmidae Subspecies:
  BIN (Cluster ID): BOLD:AAF9682
  * Barcode Index Numbers(BIN): cluster barcode sequences to create OTUs that closely reflect species groupings
  SPECIMEN DETAILS:
  Voucher Status: Vouchered:Registered Collection Reproduction:
  Tissue Descriptor: Sex:
  Brief Note: M.frenata Life Stage:
  Detailed Notes: parasites of HLC-16300 roadkill
 
  COLLECTION DATA:
  Country: Canada Date Collected: 2008-07-31
  Province/State: Alberta Collectors: J.S.Millar, A.V.Borisenko, E.Y.Liu
  Region/County: Kananaskis    
  Sector: vicinity of Barrier Lake UC Field Station, HWY 40    
  Exact Site: roadside, short spruce stand    
  Latitude: 51.029 Elevation: 1390 Meters
  Longitude: -115.038 Elv. Accuracy:
  Coord. Source: GPS WGS84 Depth:
  Coord. Accuracy: Depth Accuracy :
 
  PUBLICATIONS:
  Paul D. N. Hebert , Sujeevan Ratnasingham , Evgeny V. Zakharov , Angela C. Telfer , Valerie Levesque-Beaudin , Megan A. Milton , Stephanie Pedersen , Paul Jannetta and Jeremy R. deWaard Counting animal species with DNA barcodes: Canadian insects Philosophical transactions of the royal society b 2016-09-05;371(1702):0-0 (PDF)
 
 

  SEQUENCE: COI-5P   [Funding Source: iBOL:WG1.4]
  Sequence ID: CSBMP028-10.COI-5P GenBank Accession: HM398815
  Last Updated: 2024-04-30 Genome: Mitochondrial
  Locus: Cytochrome Oxidase Subunit 1 5' Region
  Nucleotides: 658 bp
 
AACTTTATATTTTATTTTTGGAGCATGATCTGGAATAATCGGAACTTCTTTAAGAATTTTAATTCGGACTGAATT
AGGTCAACCAGGATCCCTTATTGGTGACGACCAAATTTTTAATGTAATTGTTACTGCCCATGCATTTGTTATAAT
TTTCTTTATAGTAATGCCAATTCTAATTGGAGGGTTTGGAAATTGATTAGTACCTTTAATATTAGGAGCCCCTGA
TATAGCATTCCCTCGAATAAATAACATAAGATTTTGATTACTCCCTCCGTCATTAATTCTACTTTTATCAAGTTC
TATGGTAGAAAGAGGAGCCGGGACAGGATGAACTGTATACCCCCCTTTATCTTCAACCATCGCCCATAGAGGTTC
ATCAGTTGACTTAACAATTTTTAGCCTCCATATAGCAGGTATTTCTTCAATTTTAGGAGCTATTAATTTTATTAC
TACTTGTATTAATATACGACCTATGGGAATAAATATAGATCGTATACCTTTATTTGTATGATCAGTTTTTATTAC
AGCTTTTTTACTTTTATTATCATTACCTGTTCTTGCAGGAGCTATTACTATACTTCTTACAGACCGTAACTTAAA
TACTTCATTTTTTGACCCCGCTGGAGGAGGGGACCCTATTCTATATCAACATTTATTT
  Amino Acids:  
 
TLYFIFGAWSGMIGTSLSILIRTELGQPGSLIGDDQIFNVIVTAHAFVMIFFMVMPILIGGFGNWLVPLMLGAPD
MAFPRMNNMSFWLLPPSLILLLSSSMVESGAGTGWTVYPPLSSTIAHSGSSVDLTIFSLHMAGISSILGAINFIT
TCINMRPMGMNMDRMPLFVWSVFITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLF
  Illustrative Barcode:
 
   

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  ELECTROPHEROGRAM TRACE FILES: COI-5P
  Length Pcr Primers Seq Primer Read Status Run Date  
652 LCO1490_t1 / HCO2198_t1
M13R
Reverse med qual 2010-03-19  
672 LCO1490_t1 / HCO2198_t1
M13F
Forward high qual 2010-03-18  
 
Generated using the BOLD API

													
  Specimen Images:
  License:
CC-0 (2010)
  License Holder:
Crystal Sobel, Biodiversity Institute of Ontario, Unspecified

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Collection Site:

  Attribution:
Specimen Depository: Centre for Biodiversity Genomics
Sequencing Center:
Photography:
Collectors: J.S.Millar, A.V.Borisenko, E.Y.Liu
Specimen Identification: John M. Kinsella
Project Manager: Alex V. Borisenko
Sequencing Support: International Barcode of Life (WG1.4)