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Specimen Data Sequences Combined
  Record Details For CSBMP001-10     Back to Search: Records
  IDENTIFIERS:
  Sample ID: 10AVB-PAR0001 Museum ID: 10AVB-PAR0001
  Field ID: L#06-PARA001 Collection Code:
  Deposited In: Centre for Biodiversity Genomics
 

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  TAXONOMY:
  Phylum: Arthropoda Subfamily: Ceratophyllinae
  Class: Insecta Genus: Opisodasys
  Order: Siphonaptera Species: Opisodasys pseudarctomys
  Family: Ceratophyllidae Subspecies:
  BIN (Cluster ID): BOLD:AAO8404
  * Barcode Index Numbers(BIN): cluster barcode sequences to create OTUs that closely reflect species groupings
  SPECIMEN DETAILS:
  Voucher Status: Vouchered:Registered Collection Reproduction:
  Tissue Descriptor: Sex:
  Brief Note: G.sabrinus Life Stage:
  Detailed Notes: parasites of HLC-10660
 
  COLLECTION DATA:
  Country: Canada Date Collected:
  Province/State: Ontario Collectors: Ewa Bednorczuk
  Region/County: Hamilton    
  Sector:    
  Exact Site:    
  Latitude: 43.2 Elevation: 100 Meters
  Longitude: -79.8 Elv. Accuracy:
  Coord. Source: Gazetteer Depth:
  Coord. Accuracy: Depth Accuracy :
 
  PUBLICATIONS:
  Paul D. N. Hebert , Sujeevan Ratnasingham , Evgeny V. Zakharov , Angela C. Telfer , Valerie Levesque-Beaudin , Megan A. Milton , Stephanie Pedersen , Paul Jannetta and Jeremy R. deWaard Counting animal species with DNA barcodes: Canadian insects Philosophical transactions of the royal society b 2016-09-05;371(1702):0-0 (PDF)
 
 

  SEQUENCE: COI-5P   [Funding Source: iBOL:WG1.4]
  Sequence ID: CSBMP001-10.COI-5P GenBank Accession: HQ944237
  Last Updated: 2024-05-07 Genome: Mitochondrial
  Locus: Cytochrome Oxidase Subunit 1 5' Region
  Nucleotides: 519 bp
 
TTTATTATAATTTTTTTCATGGTTATACCTATTTTAATTGGAGGATTTGGAAATTGACTTATTCCACTTATATTA
GGAGCCCCTTATATAGCTTTCCCTCGAATAAATAATATAAGATTTTGATTATTACCTCCATCATTAATTTTATTA
TTATCTAGTTCTTTAGTAGAAAGAGGGGCAGGAACTGGNTGAACAGTATACCCACCTTTATCATCCTCAATTGCN
CATAGAGGAGCTTCAGTTGATTTAGCTATTTTTAGTTTACATATAGCAGGAATCTCATCAATTTTAGGGGCCATT
AATTTTATTACTACTTGTATTAATATACGACCTGTAGGAATAAATCTGGATCGAATACCCTTATTTGTTTGATCT
GTTTTTATTACTGCATTTTTATTATTATTATCTTTACCAGTATTAGCTGGAGCAATTACAATACTTTTAACAGAT
CGAAACTTAAATACTTCATTCTTTGATCCAGCTGGAGGGGGAGACCCTATTTTATATCAACATTTATTT
  Amino Acids:  
 
FIMIFFMVMPILIGGFGNWLIPLMLGAPYMAFPRMNNMSFWLLPPSLILLLSSSLVESGAGTXWTVYPPLSSSIX
HSGASVDLAIFSLHMAGISSILGAINFITTCINMRPVGMNLDRMPLFVWSVFITAFLLLLSLPVLAGAITMLLTD
RNLNTSFFDPAGGGDPILYQHLF
  Illustrative Barcode:
 
   

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  ELECTROPHEROGRAM TRACE FILES: COI-5P
  Length Pcr Primers Seq Primer Read Status Run Date  
294 LCO1490_t1 / MLepR1
MLepR1
Reverse high qual 2010-11-25  
283 LCO1490_t1 / MLepR1
M13F
Forward low qual 2010-11-26  
370 MLepF1 / HCO2198_t1
M13R
Reverse med qual 2010-12-04  
358 MLepF1 / HCO2198_t1
MLepF1
Forward low qual 2010-12-07  
530 LCO1490_t1 / HCO2198_t1
M13R
Reverse med qual 2010-03-19  
669 LCO1490_t1 / HCO2198_t1
M13F
Forward low qual 2010-03-18  
 
Generated using the BOLD API

													
  Specimen Images:
  License:
CC-0 (2010)
  License Holder:
Crystal Sobel, Biodiversity Institute of Ontario, Unspecified

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Collection Site:

  Attribution:
Specimen Depository: Centre for Biodiversity Genomics
Sequencing Center:
Photography:
Collectors: Ewa Bednorczuk
Specimen Identification: BOLD ID Engine
Project Manager: Alex V. Borisenko
Sequencing Support: International Barcode of Life (WG1.4)