The Public Data Portal supports queries based on taxonomy(scientific names only), geography, attribution fields (i.e. collectors and taxonomists), specimen depositories, project or dataset codes, specimen and sequence identifiers (sampleids, museumids, processed, etc). Free text searches are allowed, the system will try to extract meaningful terms from the search. Search terms should be separated by a space, search terms containing more than one word ("United States" or "Mus musculus") should be wrapped in quotes.
Search examples (Searches are case insensitive):
Culicidae: will return all the mosquitoes in the database
Mammalia Aves: will return all the mammals and birds in the database. Using two terms under the same context (taxonomic in this case), returns all records that match either term.
Aves Peru: will return all the birds collected in Peru. Using two terms under a different context (taxonomic and geographic), returns records that only match both terms.
Hawaii -Chordata: will return all non-chordates, or invertebrates, collected in Hawaii. It is often necessary to exclude records based on a search criteria and is accomplished by adding a minus sign immediately in front of the search term.
"Biodiversity Institute of Ontario" Lepidoptera Florida: will return all moths and butterflies in the Biodiversity Institute of Ontario collection that were collected in Florida. Complex queries are possible by combining multiple search terms.
Search Guidelines:
No spaces in terms when using a multiterm seach (correct: "United States" Mammalia)
Negative symbol (-) is an exclusion operator which must be preceded by a space
If the same term appears in multiple contexts (i.e. "Florida" appears in both the geography list and in "University of Florida"). When using a free text search for the state Florida, employ the context clarification '[geo]' (eg Florida[geo]). Other context clarification tags are [tax], [ids], [inst], [researcher].
Paul D. N. Hebert , Sujeevan Ratnasingham , Evgeny V. Zakharov , Angela C. Telfer , Valerie Levesque-Beaudin , Megan A. Milton , Stephanie Pedersen , Paul Jannetta and Jeremy R. deWaard Counting animal species with DNA barcodes: Canadian insects Philosophical transactions of the royal society b 2016-09-05;371(1702):0-0 (PDF)
Matthias F. Geiger, Jerome Moriniere, Axel Hausmann, Gerhard Haszprunar, Wolfgang Wägele, Paul D.N. Hebert & Björn Rulik Testing the Global Malaise Trap Program – How well does the current barcode reference library identify flying insects in Germany? Biodiversity Data Journal 2016-12-01;4(e10671):1-22 (PDF)
TREE RECONSTRUCTION OF BIN & NEAREST NEIGHBOR:
HAPLOTYPE NETWORK:
Color & Label Scheme:
COLLECTION LOCATION:
Countries:
Canada - [67]
France - [6]
Finland - [5]
Netherlands - [5]
Norway - [26]
Germany - [20]
Russia - [6]
United Kingdom - [1]
Bulgaria - [1]
India - [1]
Austria - [3]
Sweden - [1]
Italy - [2]
Portugal - [1]
Pakistan - [2]
DATA MANAGERS:
Public Data:
Private Data:
Cuong Q Tang - [1] CBG Project Management Team - [62] Alex Smith - [1] CBG Collections Unit - [7] Torbjorn Ekrem - [5] Sujeevan Ratnasingham - [4] Gunilla Stahls - [4] Stefan Schmidt - [3] Bjoern Rulik - [5] Jeffrey H Skevington - [3]
CBG Collections Unit - [26] Andrea Chiocchio - [2] Thor H Ringsby - [2] Rodolphe Rougerie - [5] CBG Project Management Team - [1] Bjoern Rulik - [5] Lars Hendrich - [4] Jeffrey H Skevington - [2] Gunilla Stahls - [1] Oscar Vorst - [5] Helge M Heimburg - [2]
Canadian National Collection of Insects, Arachnids and Nematodes - [5]
Centre for Biodiversity Genomics - [80]
Finnish Museum of Natural History, Zoological Museum - [4]
Landesmuseum Kaernten - [2]
Mined from GenBank, NCBI - [4]
Museum national d'Histoire naturelle - [5]
NTNU University Museum, Department of Natural History - [24]
Natural History Museum, London - [1]
Naturalis Biodiversity Center - [5]
Private Collection of Iiro Kakko - [1]
SNSB, Zoologische Staatssammlung Muenchen - [7]
University of Tuscia, Department of Ecological and Biological Sciences - [2]
Zoologisches Forschungsmuseum Alexander Koenig - [10]
Sequencing Centers:
Beijing Genomics Institute - [3] Centre for Biodiversity Genomics - [92] Macrogen, Europe - [1] Naturalis Biodiversity Center - [5] SNSB, Zoologische Staatssammlung Muenchen - [4]
Photography:
Anna Lempiainen - [2] CBG Photography Group - [3] CBG Robotic Imager - [2] CBG Robotic Rig - [22] Chad Whitmell - [3] Ella Sippola - [1] Jeffrey Skevington - [1] Jenni Moilanen - [1] Julien Piolain - [3] Naturalis DNA barcoding facility - [3] Piia Partanen - [2] Rick Turner - [1] Sondre Dahle - [3] Spencer Walker - [1] Thomas Lebard - [2]
Collectors:
A. Eriksen - [4] A. Laugsand - [5] A.Slater - [40] A.Voronkov - [5] Aijaz A. Wachkoo leg. - [1] Alex Smith - [1] Antti Haarto - [3] Arielle Farrell - [1] Axel Hausman - [1] BIObus 2013 - [1] Becky Yeo - [1] C.Kassebeer - [1] C.S. Guppy - [2] Chaire CRSNG Anticosti - [1] Chiara Martino - [2] Chrystal Simon - [1] D. - [7] D.Faser - [2] Doczkal - [7] Dr. Akhtar Rasool - [1] E. Stur - [2] E.Zakharov - [1] Eugenio Potito - [2] F. Odegaard - [1] F. Odegaard & O. Hanssen - [2] F.Koch - [1] GBOL-Team ZFMK - [4] Gail Bryn-Jones - [2] Gerald Skillen - [1] Giuseppe Martino - [2] H. - [2] H.Penney - [1] Heimburg - [2] I. Herfindal - [4] Iiro Kakko - [1] J. - [3] J.Baxter - [1] J.Brewster - [2] J.E.Cossey - [1] J.R.Straka - [1] Jere Kahanpaeae - [1] Kees Goudsmits - [1] L. & V. Penevi - [1] L. Avis - [1] L. Ramsay - [2] M. Oestby Nilsen - [1] Marlee St. Pierre - [1] Menno Reemer - [1] Miss Aheeba Malik - [1] Mr. Ikram Ullah - [1] N.W.Jeffery - [1] Naila Nazir Khan - [1] Patricia Kehler - [1] R. Avis - [1] R.Pojar - [1] Rebecca Stone - [1] Rulik et al - [6] S. & Voith - [3] S. Dahle - [5] S.Ferreira - [1] Sander Bot - [2] Schmidt - [3] Selena Burton - [1] Shannon Lillywhite - [1] Stephanie Smith - [1] T. Ekrem - [2] T.Davison - [2] T.H. Ringsby and B.-E. Saether - [2] Thomas Lebard - [2] Thomas Lebard & Marie Canut - [3] Thomas Zechmeister - [1] Tina Emili Volpini - [1] V.Leveille - [1] Vickie Sooley - [1] Wouter van Steenis - [1]
Specimen Identification:
Aijaz AHMAD Wachkoo - [1] Andre Reimann - [1] Andrew Young - [1] Angela Telfer - [32] Antti Haarto - [3] Axel Ssymank - [1] C. Kassebeer - [1] Dieter Doczkal - [7] Heather Penney - [1] Helge M Heimburg - [2] Iiro Kakko - [1] Ivan Wright - [1] J. Flinck - [1] Kate Perez - [61] Kees Goudsmits - [1] Libby Avis - [1] Menno Reemer - [1] Michelle Locke - [1] P. M. Brousseau - [1] Renee Miskie - [1] Sander Bot - [2] Taxonomy Unit - [1] Teresa Bonacci - [2] Thomas Lebard - [5] Tore R. Nielsen - [3] Valerie Levesque-Beaudin - [3] Wouter Van Steenis - [1] Ximo Mengual - [2]