The Public Data Portal supports queries based on taxonomy(scientific names only), geography, attribution fields (i.e. collectors and taxonomists), specimen depositories, project or dataset codes, specimen and sequence identifiers (sampleids, museumids, processed, etc). Free text searches are allowed, the system will try to extract meaningful terms from the search. Search terms should be separated by a space, search terms containing more than one word ("United States" or "Mus musculus") should be wrapped in quotes.
Search examples (Searches are case insensitive):
Culicidae: will return all the mosquitoes in the database
Mammalia Aves: will return all the mammals and birds in the database. Using two terms under the same context (taxonomic in this case), returns all records that match either term.
Aves Peru: will return all the birds collected in Peru. Using two terms under a different context (taxonomic and geographic), returns records that only match both terms.
Hawaii -Chordata: will return all non-chordates, or invertebrates, collected in Hawaii. It is often necessary to exclude records based on a search criteria and is accomplished by adding a minus sign immediately in front of the search term.
"Biodiversity Institute of Ontario" Lepidoptera Florida: will return all moths and butterflies in the Biodiversity Institute of Ontario collection that were collected in Florida. Complex queries are possible by combining multiple search terms.
Search Guidelines:
No spaces in terms when using a multiterm seach (correct: "United States" Mammalia)
Negative symbol (-) is an exclusion operator which must be preceded by a space
If the same term appears in multiple contexts (i.e. "Florida" appears in both the geography list and in "University of Florida"). When using a free text search for the state Florida, employ the context clarification '[geo]' (eg Florida[geo]). Other context clarification tags are [tax], [ids], [inst], [researcher].
Matthias F. Geiger, Jerome Moriniere, Axel Hausmann, Gerhard Haszprunar, Wolfgang Wägele, Paul D.N. Hebert & Björn Rulik Testing the Global Malaise Trap Program – How well does the current barcode reference library identify flying insects in Germany? Biodiversity Data Journal 2016-12-01;4(e10671):1-22 (PDF)
TREE RECONSTRUCTION OF BIN & NEAREST NEIGHBOR:
HAPLOTYPE NETWORK:
Color & Label Scheme:
COLLECTION LOCATION:
Countries:
Netherlands - [3]
Germany - [39]
Norway - [3]
United Kingdom - [18]
France - [1]
Portugal - [2]
Austria - [6]
Italy - [2]
DATA MANAGERS:
Public Data:
Private Data:
Bjoern Rulik - [10] Nok ting NT Lam - [1] Sonia AF Ferreira - [1] Ben W Price - [1] Matthew P Besley - [1] Stefan Schmidt - [10] Steffen Roth - [1] Geir Soli - [1] Lars ove Hansen - [2]
CBG Collections Unit - [8] Beth Clare - [10] CBG Project Management Team - [1] Helge M Heimburg - [1] Camille Le Roy - [1] Bjoern Rulik - [20] Nikolaus U Szucsich - [1] Matthew P Besley - [1] Stefan Schmidt - [1] Oscar Vorst - [2]
Research Center in Biodiversity and Genetic Resources - [1]
SNSB, Zoologische Staatssammlung Muenchen - [11]
University of Bergen, Natural History Collections - [1]
University of Glasgow, Hunterian Museum - [1]
University of Oslo, Natural History Museum - [3]
Wageningen University and Research - [1]
Zoologisches Forschungsmuseum Alexander Koenig - [30]
Sequencing Centers:
Beijing Genomics Institute - [20] Centre for Biodiversity Genomics - [38] Natural History Museum, London - [1] Naturalis Biodiversity Center - [2] University of Glasgow - [1]
Photography:
CBG Photography Group - [1] CBG Robotic Imager - [8] Camille Le Roy - [1] Gunnhild Marthinsen - [3] Helge Heimburg - [1] Hymenoptera Photo Group - [1] Naturalis DNA barcoding facility - [2] Rabl, Dominik - [1] Steffen Roth - [1]
Collectors:
Camille Le Roy - [1] Chris Fletcher - [1] D. - [9] Doczkal - [9] Dominik - [1] Dr Gavin R. Broad - [1] F.Koch - [3] Freshly collected - [1] G. Sellmayer - [1] GBOL-Team ZFMK - [20] Geir Soli - [3] Inez Januszczak - [1] J. - [9] John T. Smit - [2] Kara Layton - [3] Lars Ove Hansen - [3] Olga Sivell - [1] Rabl - [1] Rodolphe Rougerie - [1] Rui Andrade - [1] Rulik et al - [7] S. & Voith - [9] S.Ferreira - [1] Schmisdt - [9] Simon Schrott - [1] Steffen Roth - [1] Thomas Zechmeister - [4] V. Blagoderov - [1] Wieser C. - [1] students at Hersleb sec. School - [3]
Specimen Identification:
Allison Brown - [1] Bold - [1] Camille Le Roy - [1] Dieter Doczkal - [9] Dominik Rabl - [1] Duncan Sivell - [1] Geir Soli - [3] Geoff E. Hancock - [1] Hans-Georg Rudzinski - [16] Helge M Heimburg - [1] Juergen Kappert - [1] Kate Perez - [12] Liam Crowley - [1] Rui Andrade - [1] Simon Schrott - [1] Steffen Roth - [1] T. Zeegers - [2] Valerie Levesque-Beaudin - [10] Vladimir A Blagoderov - [1]