The Public Data Portal supports queries based on taxonomy(scientific names only), geography, attribution fields (i.e. collectors and taxonomists), specimen depositories, project or dataset codes, specimen and sequence identifiers (sampleids, museumids, processed, etc). Free text searches are allowed, the system will try to extract meaningful terms from the search. Search terms should be separated by a space, search terms containing more than one word ("United States" or "Mus musculus") should be wrapped in quotes.
Search examples (Searches are case insensitive):
Culicidae: will return all the mosquitoes in the database
Mammalia Aves: will return all the mammals and birds in the database. Using two terms under the same context (taxonomic in this case), returns all records that match either term.
Aves Peru: will return all the birds collected in Peru. Using two terms under a different context (taxonomic and geographic), returns records that only match both terms.
Hawaii -Chordata: will return all non-chordates, or invertebrates, collected in Hawaii. It is often necessary to exclude records based on a search criteria and is accomplished by adding a minus sign immediately in front of the search term.
"Biodiversity Institute of Ontario" Lepidoptera Florida: will return all moths and butterflies in the Biodiversity Institute of Ontario collection that were collected in Florida. Complex queries are possible by combining multiple search terms.
Search Guidelines:
No spaces in terms when using a multiterm seach (correct: "United States" Mammalia)
Negative symbol (-) is an exclusion operator which must be preceded by a space
If the same term appears in multiple contexts (i.e. "Florida" appears in both the geography list and in "University of Florida"). When using a free text search for the state Florida, employ the context clarification '[geo]' (eg Florida[geo]). Other context clarification tags are [tax], [ids], [inst], [researcher].
Matthias F. Geiger, Jerome Moriniere, Axel Hausmann, Gerhard Haszprunar, Wolfgang WΓ€gele, Paul D.N. Hebert & BjΓΆrn Rulik Testing the Global Malaise Trap Program β How well does the current barcode reference library identify flying insects in Germany? Biodiversity Data Journal 2016-12-01;4(e10671):1-22 (PDF)
TREE RECONSTRUCTION OF BIN & NEAREST NEIGHBOR:
HAPLOTYPE NETWORK:
Color & Label Scheme:
COLLECTION LOCATION:
Countries:
Germany - [63]
Norway - [12]
Finland - [4]
United Kingdom - [12]
Netherlands - [10]
France - [6]
Portugal - [1]
Serbia - [1]
Georgia - [1]
Austria - [7]
Bangladesh - [1]
Iraq - [1]
DATA MANAGERS:
Public Data:
Private Data:
Lars Hendrich - [2] Matthew P Besley - [2] Sujeevan Ratnasingham - [2] Sean W. Prosser - [1] Jeffrey H Skevington - [2] Nikolaus U Szucsich - [2] Ximo Mengual - [1] Sonia AF Ferreira - [1] Cuong Q Tang - [1] Stefan Schmidt - [1] Bjoern Rulik - [15] Torbjorn Ekrem - [2] Gunilla Stahls - [4]
Nikolaus U Szucsich - [3] CBG Collections Unit - [10] Bjoern Rulik - [48] Lars Hendrich - [2] Helge M Heimburg - [1] Jeffrey H Skevington - [4] Andrew Lucas - [3] Oscar Vorst - [10] Anita Malhtora - [1] Carlos Lopez-Vaamonde - [1] Md MIZANUR Rahman - [1]
Canadian National Collection of Insects, Arachnids and Nematodes - [6]
Centre for Biodiversity Genomics - [1]
Finnish Museum of Natural History, Zoological Museum - [4]
Institut de Recherche sur la Biologie de l'Insecte - [1]
Landesmuseum Kaernten - [1]
Mined from GenBank, NCBI - [3]
NTNU University Museum, Department of Natural History - [10]
National Museum Wales - [3]
Natural History Museum, London - [3]
Naturalis Biodiversity Center - [10]
Naturhistorisches Museum Wien - [4]
Norwegian University of Science and Technology - [1]
Research Center in Biodiversity and Genetic Resources - [1]
SNSB, Zoologische Staatssammlung Muenchen - [5]
Senckenberg Natural History Collections Dresden, Museum of Zoology - [2]
Tiroler Landesmuseum Ferdinandeum - [1]
University of Dhaka - [1]
World Museum Liverpool - [1]
Zoologisches Forschungsmuseum Alexander Koenig - [62]
Sequencing Centers:
Beijing Genomics Institute - [45] Canadian Centre for DNA Barcoding - [2] Centre for Biodiversity Genomics - [30] Macrogen, Europe - [1] Natural History Museum, London - [1] Naturalis Biodiversity Center - [10] SNSB, Zoologische Staatssammlung Muenchen - [2] Senckenberg Natural History Collections Dresden, Museum of Zoology - [1] Swansea University - [3]
Photography:
A Lucas - [6] CBG Photography Group - [1] CBG Robotic Rig - [10] Chad Whitmell - [1] Erik Bostrom - [1] Helge Heimburg - [1] Jenni Moilanen - [3] Naturalis DNA barcoding facility - [8] Piia Partanen - [1] Schoder - [2] Schoder S. - [6] Sondre Dahle - [1] Wiesmair - [1] ZSM Hymenoptera Photography Group - [2]
Collectors:
A Lucas - [3] A. Laugsand - [1] A.M. Skillestad Helmersen - [1] Alexandra Benson - [1] Anita Malhotra - [1] Antti Haarto - [3] B.Harding - [1] Benjamin; Schattanek-Wiesmair - [1] D. - [2] D. Doczkal - [1] Dan Bock - [1] Doczkal - [2] F. Lazarus - [7] F. Odegaard - [1] F. Odegaard & O. Hanssen - [1] GBOL-Team SNSD - [2] GBOL-Team ZFMK - [46] Harold Brenner - [1] I. Herfindal - [2] J Skevington - [1] J. - [1] J.H. Skevington - [3] J.R.Vockeroth - [1] Jere Kahanpaeae - [1] Jeroen van Steenis - [2] Joel Beer - [1] Kees Goudsmits - [1] Md Mizanur Rahman - [1] Mengual - [1] Menno Reemer - [2] Nikolaus - [4] Petra - [1] Philippe Gayral - [1] Rachel Price - [1] Rui Andrade - [1] Rulik et al - [14] Rulik et al. - [1] S. & Voith - [1] Sander Bot - [2] Schattanek-Wiesmair - [1] Schmidt - [1] Sue Taylor - [2] Szucsich - [4] W. Schacht - [2] Wieser C. - [1] Wouter van Steenis - [3] X. - [1]
Specimen Identification:
Andre Reimann - [7] Andrew Lucas - [3] Angela Telfer - [10] Anke Schaefer - [2] Anna Lena Mueller - [1] Antti Haarto - [3] Axel Ssymank - [5] B. Harding - [1] Bold - [1] Christian F. Kassebeer - [11] Diane Bigot - [1] Dieter Doczkal - [3] Elisabeth Stur - [1] Helge M Heimburg - [1] J. Flinck - [1] Jeffrey H Skevington - [4] Jeroen Van Steenis - [2] Juergen Esser - [6] Juergen Kappert - [5] Kate Perez - [14] Kees Goudsmits - [1] Martin C. Harvey - [1] Md MIZANUR Rahman - [1] Menno Reemer - [2] Nikolaus U Szucsich - [4] Rachel Price - [1] Rui Andrade - [1] Sander Bot - [2] Sue Taylor - [2] Tore R. Nielsen - [1] Wolfgang Schacht - [2] Wouter Van Steenis - [3] Ximo Mengual - [11]