The Public Data Portal supports queries based on taxonomy(scientific names only), geography, attribution fields (i.e. collectors and taxonomists), specimen depositories, project or dataset codes, specimen and sequence identifiers (sampleids, museumids, processed, etc). Free text searches are allowed, the system will try to extract meaningful terms from the search. Search terms should be separated by a space, search terms containing more than one word ("United States" or "Mus musculus") should be wrapped in quotes.
Search examples (Searches are case insensitive):
Culicidae: will return all the mosquitoes in the database
Mammalia Aves: will return all the mammals and birds in the database. Using two terms under the same context (taxonomic in this case), returns all records that match either term.
Aves Peru: will return all the birds collected in Peru. Using two terms under a different context (taxonomic and geographic), returns records that only match both terms.
Hawaii -Chordata: will return all non-chordates, or invertebrates, collected in Hawaii. It is often necessary to exclude records based on a search criteria and is accomplished by adding a minus sign immediately in front of the search term.
"Biodiversity Institute of Ontario" Lepidoptera Florida: will return all moths and butterflies in the Biodiversity Institute of Ontario collection that were collected in Florida. Complex queries are possible by combining multiple search terms.
Search Guidelines:
No spaces in terms when using a multiterm seach (correct: "United States" Mammalia)
Negative symbol (-) is an exclusion operator which must be preceded by a space
If the same term appears in multiple contexts (i.e. "Florida" appears in both the geography list and in "University of Florida"). When using a free text search for the state Florida, employ the context clarification '[geo]' (eg Florida[geo]). Other context clarification tags are [tax], [ids], [inst], [researcher].
Paul D. N. Hebert , Sujeevan Ratnasingham , Evgeny V. Zakharov , Angela C. Telfer , Valerie Levesque-Beaudin , Megan A. Milton , Stephanie Pedersen , Paul Jannetta and Jeremy R. deWaard Counting animal species with DNA barcodes: Canadian insects Philosophical transactions of the royal society b 2016-09-05;371(1702):0-0 (PDF)
Matthias F. Geiger, Jerome Moriniere, Axel Hausmann, Gerhard Haszprunar, Wolfgang Wägele, Paul D.N. Hebert & Björn Rulik Testing the Global Malaise Trap Program – How well does the current barcode reference library identify flying insects in Germany? Biodiversity Data Journal 2016-12-01;4(e10671):1-22 (PDF)
Gontran Sonet, Kurt Jordaens, Yves Braet, Luc Bourguignon, Erena Dupont, Thierry Backeljau, Marc de Meyer and Stijn Desmyter Utility of GenBank and the Barcode of Life Data Systems (BOLD) for the identification of forensically important Diptera from Belgium and France ZooKeys 2013-12-30;365:307-328 (PDF)
TREE RECONSTRUCTION OF BIN & NEAREST NEIGHBOR:
HAPLOTYPE NETWORK:
Color & Label Scheme:
COLLECTION LOCATION:
Countries:
Canada - [66]
United States - [77]
Belgium - [1]
Finland - [9]
Germany - [41]
Netherlands - [1]
Russia - [1]
Poland - [2]
Norway - [4]
Portugal - [1]
Pakistan - [8]
Italy - [6]
Sweden - [1]
United Kingdom - [1]
Lebanon - [2]
DATA MANAGERS:
Public Data:
Private Data:
Tim Whittier - [1] Stefan Schmidt - [4] CBG Project Management Team - [77] Beverly Mcclenaghan - [1] Jim M. Moore - [1] Aina Aspaas - [2] Bjoern Rulik - [4] Sonia AF Ferreira - [1] Sujeevan Ratnasingham - [2] Jere Kahanpaa - [1] Gontran Sonet - [1] Ben W Price - [1] Jade Savage - [1]
CBG Collections Unit - [64] CBG Project Management Team - [5] Geir Soli - [1] Jonathan B Reil - [4] Bjoern Rulik - [38] Jeffrey H Skevington - [1] Steffen Roth - [1] Sara Villa - [1] Marko Mutanen - [7] Oscar Vorst - [1] Jere Kahanpaa - [1]
BIN COMPLIANT WITH METADATA REQUIREMENTS
Specimen Images:
JMFLY093-13 {Neomyia cornicina}
License:
CreativeCommons Attribution (2012)
License Holder:
CBG Photography Group, Centre for Biodiversity Genomics
Canadian National Collection of Insects, Arachnids and Nematodes - [1]
Centre for Biodiversity Genomics - [147]
Finnish Museum of Natural History, Zoological Museum - [1]
Mined from GenBank, NCBI - [2]
National Institute of Criminalistics and Criminology, Belgium - [1]
Natural History Museum, London - [1]
Naturalis Biodiversity Center - [1]
Private Collection of H. Haraldseide - [2]
Research Center in Biodiversity and Genetic Resources - [1]
Research Collection of Beverly Mcclenaghan - [1]
SNSB, Zoologische Staatssammlung Muenchen - [4]
University of Bergen, Natural History Collections - [1]
University of Hawaii Insect Museum - [4]
University of Milan - [1]
University of Oslo, Natural History Museum - [1]
University of Oulu - [7]
University of Turku, Zoological Museum - [1]
Zoologisches Forschungsmuseum Alexander Koenig - [42]
Sequencing Centers:
Beijing Genomics Institute - [38] Centre for Biodiversity Genomics - [99] Naturalis Biodiversity Center - [1] Royal Belgian Institute of Natural Sciences - [1]
Photography:
Alex Knapp - [5] CBG Photography Group - [3] CBG Robotic Imager - [1] CBG Robotic Rig - [64] Hakon Haraldseide - [2] Ian Watkinson - [1] Jim Moore - [3] Kristen Mancuso - [1] Lauren Seymour - [9] Maria Faticov - [2] Marjo Heikkinen - [7] Megan Swan - [1] Meri Lähteenaro - [1] Rick Turner - [1] Spencer Walker - [1] St. Roth - [1] Veronique Bellavance - [1]
Collectors:
A.Borisenko - [1] Antti Haarto - [1] Austin; Laine - [3] B. McClenaghan - [1] B. Smith - [1] BIO Collections - [3] BIObus 2008 - [1] BIObus 2009 - [1] BIObus 2010 - [5] Baker - [3] Benjamin - [9] Benjamin Maples - [3] Benjamin; Hardage - [1] Benjamin; Koehler - [1] Biobus 2010 - [9] CBG Collections Staff - [1] Carla Palangio - [1] Cathy - [1] Chrystal Simon - [4] D. - [4] Doczkal - [4] Dr. Akhtar Rasool - [3] EE - [1] Ellie - [1] Emma - [4] Erik Kristensen - [1] Eva - [1] Eva; Allingham - [1] Eva; Deer - [1] Eva; Kjurstens - [4] Eva; Wall - [1] G. Kung - [3] GBOL-Team ZFMK - [38] Gerald B. Skillen - [1] Giar-Ann - [5] Greg Meredith - [1] Hakon Haraldseide - [2] Hans Huijbregts - [1] Horna Lowell - [8] J. - [4] J. Cossey - [8] J. Heraty - [3] J. Webb - [1] J.B. Reil; C. Elliott - [1] J.B. Reil; C. Gillett - [1] J.B. Reil; D. Honsberger; J. Eiben - [2] J.Cossey - [1] J.H. Skevington - [1] JD - [1] Jacob; Perez - [1] Janna Lenius - [1] Jeff Johnson - [1] Jere Kahanpaeae - [1] Jesse - [2] Jesse; Tang - [1] Jim Moore - [1] Johan Heinrich Spalckhawer Siebke - [1] Jones - [1] Julia - [1] K. Dominguez - [3] K. Moran - [1] K. Seydel - [2] K.Perez - [1] KA Williams - [1] Kaia Harbour - [14] Kimorie Lees - [1] Korneyev - [11] Kristina J. Anderson - [2] Kung - [5] Labo MIC - [1] M. Macary - [2] M. Piepenbrink - [7] M.Otway - [9] Maria Breton - [4] Michael - [1] Michael Cottrill - [2] Michael Graham - [1] Michael Sharkey - [4] Miss Aheeba Malik - [3] Mr. Ikram Ullah - [3] Naila Nazir Khan - [5] Nathan - [1] Nicole Labine - [1] Paul Hebert - [17] Rachel - [1] Riksmyrsprosjekt - [1] Robert Wolton - [1] Rui Andrade - [1] Rulik et al - [4] S. & Voith - [4] S. Heacox - [3] S. V. Triapitsyn - [2] S.McCubbin - [1] Sara Villa - [1] Schmidt - [4] Scott - [1] Severyn Korneyev - [3] Severyn; Maples - [11] Shannon McLeod - [1] T Whittier - [1] Tomislav Terzin - [1] V. Sorokina - [1]
Specimen Identification:
Angela Telfer - [22] Bold - [2] Dieter Doczkal - [2] Hakon Haraldseide - [2] Hans Huijbregts - [1] Hans-Georg Rudzinski - [20] Jade Savage - [46] Jim M. Moore - [1] Jonathan B Reil - [4] Juergen Kappert - [9] Kaj Winqvist - [1] Kate Perez - [24] Knut Rognes - [1] Paul D.N. Hebert - [1] Renee Miskie - [4] Robert Wolton - [1] Rui Andrade - [1] Sara Villa - [1] Terry L. Whitworth - [10] Vera S. Sorokina - [1] Wolfgang Adaschkiewitz - [7] Yves Braet - [1]