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The Public Data Portal supports queries based on taxonomy(scientific names only), geography, attribution fields (i.e. collectors and taxonomists), specimen depositories, project or dataset codes, specimen and sequence identifiers (sampleids, museumids, processed, etc). Free text searches are allowed, the system will try to extract meaningful terms from the search. Search terms should be separated by a space, search terms containing more than one word ("United States" or "Mus musculus") should be wrapped in quotes.
Search examples (Searches are case insensitive):
Culicidae: will return all the mosquitoes in the database
Mammalia Aves: will return all the mammals and birds in the database. Using two terms under the same context (taxonomic in this case), returns all records that match either term.
Aves Peru: will return all the birds collected in Peru. Using two terms under a different context (taxonomic and geographic), returns records that only match both terms.
Hawaii -Chordata: will return all non-chordates, or invertebrates, collected in Hawaii. It is often necessary to exclude records based on a search criteria and is accomplished by adding a minus sign immediately in front of the search term.
"Biodiversity Institute of Ontario" Lepidoptera Florida: will return all moths and butterflies in the Biodiversity Institute of Ontario collection that were collected in Florida. Complex queries are possible by combining multiple search terms.
Search Guidelines:
No spaces in terms when using a multiterm seach (correct: "United States" Mammalia)
Negative symbol (-) is an exclusion operator which must be preceded by a space
If the same term appears in multiple contexts (i.e. "Florida" appears in both the geography list and in "University of Florida"). When using a free text search for the state Florida, employ the context clarification '[geo]' (eg Florida[geo]). Other context clarification tags are [tax], [ids], [inst], [researcher].
Paul D. N. Hebert , Sujeevan Ratnasingham , Evgeny V. Zakharov , Angela C. Telfer , Valerie Levesque-Beaudin , Megan A. Milton , Stephanie Pedersen , Paul Jannetta and Jeremy R. deWaard Counting animal species with DNA barcodes: Canadian insects Philosophical transactions of the royal society b 2016-09-05;371(1702):0-0 (PDF)
Matthias F. Geiger, Jerome Moriniere, Axel Hausmann, Gerhard Haszprunar, Wolfgang WΓ€gele, Paul D.N. Hebert & BjΓΆrn Rulik Testing the Global Malaise Trap Program β How well does the current barcode reference library identify flying insects in Germany? Biodiversity Data Journal 2016-12-01;4(e10671):1-22 (PDF)
TREE RECONSTRUCTION OF BIN & NEAREST NEIGHBOR:
HAPLOTYPE NETWORK:
Color & Label Scheme:
COLLECTION LOCATION:
Countries:
Canada - [39]
Pakistan - [19]
Lebanon - [1]
United States - [10]
Spain - [4]
Finland - [18]
United Kingdom - [6]
Norway - [3]
Serbia - [5]
Germany - [46]
Netherlands - [12]
Israel - [1]
Portugal - [3]
Sweden - [5]
France - [5]
Austria - [4]
India - [3]
Georgia - [3]
China - [15]
Slovakia - [1]
DATA MANAGERS:
Public Data:
Private Data:
Ben W Price - [1] Mindi Summers - [1] Matthew P Besley - [2] Ladislav Roller - [1] CBG Project Management Team - [38] Sujeevan Ratnasingham - [5] Nikolaus U Szucsich - [3] Jeffrey H Skevington - [6] Ximo Mengual - [3] Dirk Steinke - [5] Sonia AF Ferreira - [3] Ramya Manjunath - [1] Beverly Mcclenaghan - [1] Bjoern Rulik - [1] Gunilla Stahls - [1] Torbjorn Ekrem - [2] Sean W. Prosser - [1]
Camille Le Roy - [4] CBG Collections Unit - [14] Jeffrey H Skevington - [14] Zhang Tingting - [5] Marko Mutanen - [15] Marcel Polling - [3] Bjoern Rulik - [50] Patricia L Jones - [1] CBG Project Management Team - [3] Gunilla Stahls - [2] Helge M Heimburg - [1] Rodolphe Rougerie - [2] Andrew Lucas - [1] Oscar Vorst - [5] Jeremy deWaard - [1] Fei Mo - [10]
Canadian National Collection of Insects, Arachnids and Nematodes - [16]
Centre for Biodiversity Genomics - [56]
China Agricultural University - [10]
Finnish Museum of Natural History, Zoological Museum - [1]
Landesmuseum Kaernten - [1]
Mined from GenBank, NCBI - [7]
Museum national d'Histoire naturelle - [2]
NTNU University Museum, Department of Natural History - [3]
National Institute for Biotechnology and Genetic Engineering - [4]
National Museum Wales - [1]
Natural History Museum, London - [3]
Naturalis Biodiversity Center - [5]
Naturhistorisches Museum Wien - [3]
Private Collection of Iiro Kakko - [2]
Research Center in Biodiversity and Genetic Resources - [3]
Shandong Agricultural University - [5]
Slovak National Museum, Natural History Museum - [1]
University of Calgary - [1]
University of Guelph - [1]
University of Manitoba, Wallis Roughley Museum of Entomology - [3]
University of Oulu - [15]
Wageningen University and Research - [7]
Zoologisches Forschungsmuseum Alexander Koenig - [55]
Sequencing Centers:
Beijing Genomics Institute - [50] Canadian Centre for DNA Barcoding - [1] Centre for Biodiversity Genomics - [81] China Agricultural University - [4] Macrogen, Europe - [3] Microsynth AG - [1] Natural History Museum, London - [2] Naturalis Biodiversity Center - [5] Swansea University - [1] University of Calgary - [1]
Photography:
A. Lucas - [2] Alison Forde - [2] CBG Photography Group - [10] CBG Robotic Rig - [15] Camille Le Roy - [4] Chad Whitmell - [4] Fei Mo - [4] Jaclyn McCormick - [6] Jay Cossey - [2] Jenni Moilanen - [1] Julien Piolain - [1] Kati Tran - [4] Libby Avis - [8] Marek Semelbauer - [1] Marjo Heikkinen - [15] Naturalis DNA barcoding facility - [4] Rick Turner - [3] Sabine Schoder - [1] Saleem Akhtar - [4] Schoder S. - [2] Sondre Dahle - [2] Spencer Walker - [1] Thomas Lebard - [1] sun chentao - [10]
Collectors:
A.K.Walker - [1] Aija White - [1] Allan Woodhouse - [1] Austin; Laine - [1] B. - [1] B. McClenaghan - [1] B. Smith - [1] B.Harding - [1] BIO Team - [1] BIObus 2009 - [7] BIObus 2010 - [4] BIObus 2013 - [1] Baker - [1] Biobus 2011 - [8] Camille Le Roy - [4] Chrystal Simon - [1] Dan Bock - [1] Dr Mike Ashworth - [1] Dr. Akhtar Rasool - [8] Ellen Richard - [5] Etai Kahana - [1] F. Lazarus - [1] F. Odegaard & O. Hanssen - [2] Fei Mo - [10] G.E.Shewell - [1] GBOL-Team ZFMK - [50] GGBC members et al. - [1] H. - [1] Heimburg - [1] I.Carmichael - [1] Iiro Kakko - [2] J Skevington - [3] J&R Skevington - [2] J. Cossey - [1] J. Skevington - [3] J. Webb - [1] J.H. Skevington - [1] J.Skevington - [1] James Sones - [1] Jere Kahanpaeae - [1] Jesse; Tang - [1] Kees Goudsmits - [1] Koblmueller - [1] L. Avis - [5] L.Bartels - [1] LIAM CROWLEY - [1] Leg. E. Corts - [1] M A Hannan - [3] M. & Thormann - [1] M. Piepenbrink - [15] M. Seal - [1] M. Semelbauer - [1] Marcel Polling - [3] Mengual - [2] Miles Zhang - [1] Miss Aheeba Malik - [8] Mr. Ikram Ullah - [8] Naila Nazir Khan - [2] Nathan; Reyes - [1] Nazir Ahmed - [1] Nikolaus - [1] Nina Villing - [3] P. Kevan - [1] Paul Hebert - [1] R. Avis - [5] Rabl - [1] Rui Andrade - [3] Rulik et al - [1] S Plummer - [1] S. Akhtar - [4] S. Fazal - [4] Sander Bot - [5] Shuyi Zhang - [6] Stefan - [1] Stephan - [1] Sue Taylor - [1] Sun Chentao - [5] Sylvia - [1] Szucsich - [1] Thomas Lebard - [1] Thomas Lebard & Marie Canut - [1] Wim Dimmers - [3] X. - [1] X. & Espeland - [1] Zhunan Zhao - [6]
Specimen Identification:
Aija F White - [1] Andre Reimann - [5] Andrew Lucas - [1] Angela Telfer - [6] Anke Schaefer - [1] Axel Ssymank - [4] B. Harding - [1] BOLD ID Engine - [1] Bernd Nickel - [4] Camille Le Roy - [4] Chentao Sun - [5] Christian F. Kassebeer - [10] Dirk Steinke - [5] Fei Mo - [10] Hans-Georg Rudzinski - [1] Helge M Heimburg - [1] I. Carmichael - [1] Iiro Kakko - [2] J. Flinck - [1] Jeffrey H Skevington - [14] Juergen Esser - [14] Juergen Kappert - [2] Julie K. Stahlhut - [1] Kate Perez - [5] Kees Goudsmits - [1] Libby Avis - [5] Linde Slikboer - [3] M. Semelbauer - [1] Mike Ashworth - [1] Muhammad Ashfaq - [4] Nikolaus U Szucsich - [2] Paul D.N. Hebert - [8] Renee Miskie - [2] Rui Andrade - [3] Sander Bot - [5] Stefan Rabl - [1] Sue Taylor - [1] Taxonomy Unit - [1] Thomas Lebard - [2] Tore R. Nielsen - [2] Valerie Levesque-Beaudin - [4] Ximo Mengual - [12]