The Public Data Portal supports queries based on taxonomy(scientific names only), geography, attribution fields (i.e. collectors and taxonomists), specimen depositories, project or dataset codes, specimen and sequence identifiers (sampleids, museumids, processed, etc). Free text searches are allowed, the system will try to extract meaningful terms from the search. Search terms should be separated by a space, search terms containing more than one word ("United States" or "Mus musculus") should be wrapped in quotes.
Search examples (Searches are case insensitive):
Culicidae: will return all the mosquitoes in the database
Mammalia Aves: will return all the mammals and birds in the database. Using two terms under the same context (taxonomic in this case), returns all records that match either term.
Aves Peru: will return all the birds collected in Peru. Using two terms under a different context (taxonomic and geographic), returns records that only match both terms.
Hawaii -Chordata: will return all non-chordates, or invertebrates, collected in Hawaii. It is often necessary to exclude records based on a search criteria and is accomplished by adding a minus sign immediately in front of the search term.
"Biodiversity Institute of Ontario" Lepidoptera Florida: will return all moths and butterflies in the Biodiversity Institute of Ontario collection that were collected in Florida. Complex queries are possible by combining multiple search terms.
Search Guidelines:
No spaces in terms when using a multiterm seach (correct: "United States" Mammalia)
Negative symbol (-) is an exclusion operator which must be preceded by a space
If the same term appears in multiple contexts (i.e. "Florida" appears in both the geography list and in "University of Florida"). When using a free text search for the state Florida, employ the context clarification '[geo]' (eg Florida[geo]). Other context clarification tags are [tax], [ids], [inst], [researcher].
Björn Rulik, Jonas Eberle, Laura von der Mark, Jana Thormann, Manfred Jung, Frank Köhler, Wolfgang Apfel, Andreas Weigel, Andreas Kopetz, Jonas Köhler, Frank Fritzlar, Matthias Hartmann, Karl Hadulla, Joachim Schmidt, Thomas Hörren, Detlef Krebs, Florian Theves, Ute Eulitz, André Skale, Dirk Rohwedder, Andreas Kleeberg, Jonas J. Astrin, Matthias F. Geiger, J. Wolfgang Wägele, Peter Grobe & Dirk Ahrens Using taxonomic consistency with semi‐automated data pre‐processing for high quality DNA barcodes Methods in Ecology and Evolution 2017-05-29;8(12):1878-1887 (PDF)
Angela C Telfer, Monica R Young, Jenna Quinn, Kate Perez, Crystal N Sobel, Jayme E Sones, Valerie Levesque-Beaudin, Rachael Derbyshire, Jose Fernandez-Triana, Rodolphe Rougerie, Paul D N Hebert, Jeremy R deWaard and contributors. Biodiversity inventories in high gear: DNA barcoding facilitates a rapid biotic survey of a temperate nature reserve Biodiversity Data Journal 2015-08-30;3(e6313):1-176 (PDF)
Paul D. N. Hebert , Sujeevan Ratnasingham , Evgeny V. Zakharov , Angela C. Telfer , Valerie Levesque-Beaudin , Megan A. Milton , Stephanie Pedersen , Paul Jannetta and Jeremy R. deWaard Counting animal species with DNA barcodes: Canadian insects Philosophical transactions of the royal society b 2016-09-05;371(1702):0-0 (PDF)
Matthias F. Geiger, Jerome Moriniere, Axel Hausmann, Gerhard Haszprunar, Wolfgang Wägele, Paul D.N. Hebert & Björn Rulik Testing the Global Malaise Trap Program – How well does the current barcode reference library identify flying insects in Germany? Biodiversity Data Journal 2016-12-01;4(e10671):1-22 (PDF)
Jeremy R. deWaard, Valerie Levesque-Beaudin, Stephanie L. deWaard, Natalia V. Ivanova, Jaclyn T.A. McKeown, Renee Miskie, Suresh Naik, Kate H.J. Perez, Sujeevan Ratnasingham, Crystal N. Sobel, Jayme E. Sones, Claudia Steinke, Angela C. Telfer, Andrew D. Young, Monica R. Young, Evgeny V. Zakharov, and Paul D.N. Hebert Expedited assessment of terrestrial arthropod diversity by coupling Malaise traps with DNA barcoding. Genome 2018-09-26 (PDF)
Jingchan Hu, Mikko Pentinsaari, Paul D.N. Hebert Measuring mass: variation among 3,161 species of Canadian Coleoptera and the prospects of a mass registry for all insects PeerJ 2022-01-21;1(1):12 (PDF)
TREE RECONSTRUCTION OF BIN & NEAREST NEIGHBOR:
No tree is generated when there are less than 3 or more than 1000 public records.
COLLECTION LOCATION:
Countries:
Canada - [534]
Russia - [81]
United States - [162]
Belgium - [2]
South Africa - [74]
Argentina - [32]
Germany - [88]
Netherlands - [2]
China - [94]
South Korea - [5]
Japan - [26]
Italy - [20]
United Kingdom - [41]
Bulgaria - [35]
Chile - [4]
Mexico - [1]
Romania - [3]
Colombia - [2]
France - [5]
Brazil - [1]
Poland - [4]
Austria - [5]
Finland - [1]
Czech Republic - [1]
Norway - [1]
Hungary - [2]
Uruguay - [1]
DATA MANAGERS:
Public Data:
Private Data:
Sujeevan Ratnasingham - [314] Student Portal Manager - [10] Sean W. Prosser - [1] Ben W Price - [1] Manuela MB Bartel - [1] CBG Collections Unit - [640] Nikolaus U Szucsich - [1] Mat Seidensticker - [6] Ramya Manjunath - [1] Stefan Schmidt - [8] Beverly Mcclenaghan - [14] Bjoern Rulik - [19] Marcela K. Castelo - [6] Michelle D'Souza - [1] Christopher Meyer - [1] Andrew J. Frewin - [2] Cecilia Kopuchian - [12] Alex Smith - [1] Michelle van der Bank - [3]
CBG Collections Unit - [178] Miduna Rahulan - [7] Yuri Yokoyama - [6] Heather R Allen - [4] Bjoern Rulik - [5] Thibaud Decaens - [1] Tengteng Liu - [46] Frode Odegaard - [1] Daeju Oh - [1] Nikolaus U Szucsich - [2] Rodolphe Rougerie - [2] Mikko Pentinsaari - [1] Muhammad Ashfaq - [2] Stephan Koblmueller - [2] Ciceoi Roxana - [3] Adrien Gallou - [1] Lara D Gibson - [4] Cecilia Kopuchian - [1] Marcela K. Castelo - [3] Oscar Vorst - [2] Jeongheui Lim - [3] Evgeny V. Zakharov - [2] Chenxi Liu - [2] Mario Giambiasi - [1]
BIN COMPLIANT WITH METADATA REQUIREMENTS
Specimen Images:
CNPPC1825-12 {Harmonia axyridis}
License:
CreativeCommons Attribution (2013)
License Holder:
CBG Photography Group, Centre for Biodiversity Genomics
Canadian National Collection of Insects, Arachnids and Nematodes - [1]
Centre for Biodiversity Genomics - [817]
Centro Nacional de Referencia de Control Biologico, Mexico - [1]
Chinese Academy of Agricultural Sciences, Institute of Plant Protection - [2]
Dalhousie University, Dept of Biology - [4]
Instituto Nacional de Investigacion Agropecuaria - [1]
Jeju Technopark Biodiversity Research Institute - [1]
MPG Ranch - [1]
Mined from GenBank, NCBI - [316]
Museo Argentino de Ciencias Naturales, Bernardino Rivadavia - [32]
Museum National d'Histoire Naturelle, Paris - [2]
NTNU University Museum - [1]
Nagoya City University, Graduate School of Science - [6]
National Science Museum of Korea - [3]
Natural History Museum, London - [5]
Naturalis Biodiversity Center - [2]
Naturhistorisches Museum Wien - [3]
Oekoteam, Institute for Animal Ecology and Landscape Planning - [2]
Research Collection of Beverly Mcclenaghan - [6]
SNSB, Zoologische Staatssammlung Muenchen - [26]
Senckenberg Natural History Collections Dresden, Museum of Zoology - [1]
Shandong Normal University - [46]
Smithsonian Institution - [1]
Universite de Montpellier - [1]
University of Agronomic Sciences and Veterinary Medicine of Bucharest - [3]
University of Johannesburg - [3]
University of New England - [5]
University of Oulu - [1]
Zoologisches Forschungsmuseum Alexander Koenig - [24]
Sequencing Centers:
Beijing Genomics Institute - [6] Canadian Centre for DNA Barcoding - [3] Centre for Biodiversity Genomics - [673] Centro Nacional de Referencia de Control Biologico, Mexico - [1] Chinese Academy of Agricultural Sciences, Institute of Plant Protection - [2] Generic Commercial Labs - [10] Macrogen, Europe - [1] Macrogen, Korea - [13] Nagoya City University, Graduate School of Science - [6] Natural History Museum, London - [4] Naturalis Biodiversity Center - [2] Smithsonian Institution, Laboratories of Analytical Biology - [1]
Photography:
Alison Forde - [6] Allison Sample - [1] BFB handling team - [4] CBG Photography Group - [25] CBG Robotic Imager - [18] CBG Robotic Rig - [36] Ciceoi Roxana - [5] Cynthia Chang - [2] David Liittschwager - [1] Ethan Shain - [1] Geraldine Tellbuescher - [2] Hymenoptera Photo Group - [1] Iina Eskelinen - [1] Jaclyn McCormick - [8] Jinhong Dong - [2] José Manuel Rodríguez-Vélez - [1] Julien Touroult - [1] Junjie Chen - [24] Kamal Ahmed Khan - [22] Kaylea Lundin - [1] Kristen Mancuso - [20] Lauren Seymour - [1] M. Seidensticker - [1] Naturalis DNA barcoding facility - [2] Nick Jeffery - [1] Olivier Maurin - [3] Paula Florencia Zermoglio, Jose Emilio Crespo - [10] Rick Turner - [1] Robbye Raisher - [2] Schoder Sabine - [6] Se-Jin Kim - [2] Sofia Fabiano - [8] Spencer Walker - [4] Sylvia Grune Loffler - [15] Thibault Ramage - [1] Valentina Tyukosova - [1] Vicki Salo - [1] Yanni Leclerc - [1] xiaoqing xian - [2]
Collectors:
A. Fortino - [3] A. Suvorov - [34] A.Borisenko - [11] A.Voronkov - [3] Abida Nasreen - [2] Adam Brittain - [1] Aimee Breton - [1] Alex Smith - [1] Allan Woodhouse - [13] Allison Sample - [1] Amanda Middleton - [5] Amy Brunning - [13] Amy Fennell - [2] Amy Murray - [2] Amy Stepanek - [1] Andrew Frewin - [1] Anik Chevalier - [3] Anne Grieve - [3] Anne Parkhill - [2] Annette Nelson-Szpak - [1] Anu Nagpal - [2] Ariel McDowell - [1] Aurenhammer - [2] Axel Hausman - [34] B. McClenaghan - [14] BIO Collections - [5] BIO Collections Staff - [155] BIO Team - [12] BIObus 2008 - [5] BIObus 2009 - [1] BIObus 2010 - [3] BIObus 2013 - [1] BIObus: A.Borisenko - [1] Barb Maschke - [1] Becky Nichols - [3] Benjamin Baumgarte - [1] Bernard Martin - [1] BioBus 2011 - [12] Biobus 2010 - [6] Biobus 2011 - [4] Brandon van Sten - [3] C Deschodt - [2] C. Deschodt and E. Corstorphine - [1] C. Jung - [1] C. Kopuchian - [1] C. Kopuchian and N. Garcia - [10] C.Sobel - [1] C.Vandermeer - [1] CBG Collections - [1] CBG Collections Staff - [9] Cameron Morrison - [3] Caroline Chimeno - [1] Castelo MK y PF Zermoglio - [2] Chenxi Liu - [20] Chris Johnstone - [1] Chris Meyer - [1] Chris Roth - [4] Christine Carriere-Roth - [13] Christine Gubesch - [1] Christy Wu - [1] Ciceoi Roxana - [1] Claire Gulliver - [1] Cynthia Chang - [1] D.Faser - [3] Dan Bock - [1] David Burns - [2] David Liittschwager - [1] David Manduca - [2] David Servos - [2] Dawn Morva - [7] Deane Atherton - [2] Denise Cameron - [1] Dominik - [3] Don Kemball - [1] Dr Ian Sims - [1] Dr Landry - [1] Drew Ginter - [2] Duane Brown - [1] E Corstorphine - [2] E. Nunez Bustos - [13] E. Zakharov - [4] E.Zakharov - [3] Eric Malgas - [1] Erin Fitzgibbon - [1] F. - [1] F. & J. Koehler - [1] F. & W. Koehler - [1] Frode Oedegaard - [1] G.Meredith - [2] GBOL-Team ZFMK - [20] Gail Molenaar - [1] Gerald Skillen - [2] Geraldine Tellbuescher - [1] Gergin Blagoev - [7] Gonzalo Matinez - [1] Guifen Zhang - [2] H. Muehle - [1] Hannah Fraser - [1] Heather Cole - [1] Heidi Brown - [3] Herman Staude - [6] Hong-gi Min - [3] I. Iliev - [2] I.A. Zakharov - [87] J. Cossey - [12] J. Touroult & F. Soldati - [1] J. deWaard - [6] J.Baxter - [2] J.Cossey - [19] J.E.Cossey - [1] J.L.Stiles - [8] J.McCormick - [7] J.R.Straka - [1] J.Smith - [1] J.Sones - [7] J.deWaard - [2] James Sones - [1] Janne Liikanen - [1] Jeff Baty - [2] Jen and Hilary Bayer - [1] Jeramie Jenkins - [1] Jeremy DeWaard - [1] Jeremy deWaard - [1] Jinhong Dong - [1] JoEllen Jensen - [1] Joanne Arcand - [1] Joanne Glavic - [1] John Limoges - [1] Jose Manuel Rodriguez-Velez - [1] Josh Ellis - [1] Joshua Kohn - [2] Juhani Itamies - [1] Julie McColl - [1] Julien Touroult - [1] K.Perez - [12] Kamal Ahmed Khan and Riaz Hussain - [22] Karen Walker - [1] Kaylea Lundin - [1] Keita Matsumoto - [1] Kelli Neaven - [1] Kevin Klassen - [3] Kim Oppertshauser - [2] Koehler - [4] Kristen McGuire - [5] L. & V. Penevi - [33] L. Ramsay - [3] L.Hendrich - [1] Leslie Barker - [1] Lindsay Metruk - [2] Lisa Cairncross - [2] Lise Trudeau-Balcaen - [1] M Cooper - [2] M.B.Lynch - [3] M.Brown - [1] M.Cain - [1] M.Milton - [1] M.Mortimer - [2] M.Neerhof - [3] Mailyn Gonzalez - [2] Marcela Karina Castelo - [3] Maria Breton - [1] Maria Eugenia Barrantes - [4] Mark Gurney - [1] Mark Mello - [2] Mary-Ann Mitchler - [4] Mat Seidensticker - [6] Maureen Asselin - [1] Maxim Larrivee - [2] Melissa Randle - [2] Meridith White - [2] Meurel Baloyi - [1] Mfumaneko Mdengethunga - [2] Michael D. Wilson - [1] Michael Hendrick - [1] Michelle Gibbs - [7] Mikko Pentinsaari - [1] Monki Siza - [2] Mpho Mathalauga - [7] N.Bloomfield - [2] N.Silverson - [5] N.Vastenhout - [1] N.W.Jeffery - [1] Natasha Charpentier - [8] Nicholas Seebach - [4] Nicole Anthony - [3] Nicole Burke - [1] Nomndeni Nkosi - [20] O.Vorst - [1] P. Hebert - [2] P. Tubaro y D. Lijtmaer - [2] P.L. Tubaro - [1] Pablo Tubaro - [10] Parks Canada Staff - [2] Patricia Kehler - [1] Paul Hebert - [19] Paul Kossowski - [2] Peter Farrell - [36] Peter Rasberry - [4] Philip Davis - [2] Philip Hebert - [9] Philip Mokau - [1] R. - [1] R.Labbee - [1] R.Morrow - [2] Rabl - [3] Rachal Fretz - [1] Ray Scott - [1] Robbye Raisher - [1] Rodolphe Rougerie - [2] Rose Wornoff - [7] Ross Stewart - [26] Rulik et al - [5] Ryan Moulton - [1] S. deWaard - [4] S.Lipskie - [3] S.McCubbin - [11] S.Miller - [6] S.Ratnasingham - [1] Sam Tarrant - [1] Samantha Williams - [1] Sandra - [2] Sarah Lenehan - [1] Sarah Tweedt - [1] Sarsan Andreea - [2] Savanna - [2] Scott Cates - [1] Se-Jin Kim - [1] Shannon Kelly - [4] Simo Korpela - [1] Stephanie Car - [1] Stephanie Hamilton - [1] Stone Barns Center - [20] Sue Bender - [1] T.F.Mitterboeck - [1] Tanya Dyke - [1] Tengteng Liu - [24] Terry Saunders - [1] Tom Syndar - [1] Trish Thompson - [7] Tyler Peters - [1] Tyler Schaefer - [2] Tyler Zemlak - [14] Tyrone Sluymers - [1] V. Salo - [1] V.Junea - [1] V.Leveille - [2] V.Levesque-Beaudin - [1] Victoria Winchester - [2] Vincent Campolongo - [1] W. - [1] W. Goodsoe - [1] Walter Mabatha - [1] Weidlich - [1] Wintergerst - [1] Y. Leclercq - [1] Zach Kobrinsky - [1] Zach Turner - [3] Zakharov I. A. - [43] Zakharov I.A. - [8] Zhaofu Yang - [5] rare BioBlitz collecting team - [4]
Specimen Identification:
Andreas Kopetz - [5] Andrew B. T. Smith - [4] Angela Telfer - [242] Anke Schaefer - [1] BOLD ID Engine - [45] Bjoern Rulik - [2] Caitlin Vandermeer - [1] Caroline Chimeno - [1] Carsten Morkel - [2] Christian Schmidt - [1] Ciceoi Roxana - [3] Dominik Rabl - [3] Fabien Soldati - [1] Frank Koehler - [5] Frode Odegaard - [1] Gbol - [2] Gergin A. Blagoev - [1] Guifen Zhang - [2] Hong-gi Min - [3] Jayme E. Sones - [12] Jeff H. T. Strohm - [1] Jose Manuel Rodriguez Velez - [1] Kate Perez - [327] Lars Hendrich - [2] Laura von der Mark - [1] Manfred Jung - [2] Mark Gurney - [3] Marko Mutanen - [1] Matthias Hartmann - [1] Michael Geiser - [1] Mikko Pentinsaari - [107] Naoki Toda - [6] Olaf Jaeger - [3] Oscar Vorst - [2] Renee Miskie - [38] Sandra Aurenhammer - [2] Stefan Schmidt - [14] Student - [5] Thibault Ramage - [1]