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Barcode Index Number Registry For BOLD:AAB1380

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  BIN DETAILS:
  BIN URI: BOLD:AAB1380 Average Distance: 0.72% (p-dist)
  DOI: dx.doi.org/10.5883/BOLD:AAB1380 Maximum Distance: 1.99% (p-dist)
  Member Count: 109 [61 Public] Distance to Nearest Neighbor: 2.89% (p-dist)
  Barcode Compliant Members: 72
  Founding Record:
 
  NEAREST NEIGHBOR (NN) DETAILS:
  Nearest BIN URI: BOLD:ACF0288 Average Distance: 0.62% (p-dist)
  Member Count: 60 Maximum Distance: 1.76% (p-dist)
  Nearest Member: GBGCA7760-15 Distance Variance: 0.15% (p-dist)
  Nearest Member Taxonomy: Chordata, Actinopterygii, Clupeiformes, Clupeidae, Alosinae, Alosa, Alosa alosa 
 
  TAXONOMY:
  Phylum:
Chordata [110]
  Class:
Actinopterygii [110]
  Order:
Clupeiformes [97]
  Family:
Clupeidae [97]
  Subfamily:
Alosinae [96]
  Genus:
Alosa [96]
  Species:
Alosa pseudoharengus [72]
Alosa aestivalis [24]
  Subspecies:

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  DISTANCE DISTRIBUTION:
 
  PUBLICATIONS:
  Plough, Louis, V., Ogburn, Matthew Bryan, Fitzgerald, Catherine L., Geranio, Rose, Marafino, Gabriella A. and Richie, Kimberly D. Environmental DNA analysis of river herring in Chesapeake Bay: A powerful tool for monitoring threatened keystone species Plos One 2018-11-01;13(11):1-25 (PDF)
  Robert Aguilar, Matthew B. Ogburn, Amy C. Driskell, Lee A. Weigt, Mary C. Groves, Anson H. Hines Gutsy genetics: identification of digested piscine prey items in the stomach contents of sympatric native and introduced warmwater catfishes via DNA barcoding Environmental Biology of Fishes 2016-09-19;4(100):325-336 (PDF)
  M. R. McCusker, D. Denti, L. Van Guelpen, E. Kenchington and P. Bentzen Barcoding Atlantic Canada's commonly encountered marine fishes Molecular Ecology Resources 2012-12-17;13(2):177-188 (PDF)
  Sujeevan Ratnasingham and Paul D. N. Hebert A DNA-Based Registry for All Animal Species: The Barcode Index Number (BIN) System PLoS ONE 2013-07-13;8(7):e66213 (PDF)
  J. April, R. L. Mayden, R. H. Hanner and L. Bernatchez Genetic calibration of species diversity among North America's freshwater fishes Proceedings of the National Academy of Sciences 2011-06-13;108(26):10602-10607 (PDF)
  Nicolas Hubert, Robert Hanner, Erling Holm, Nicholas E. Mandrak, Eric Taylor, Mary Burridge, Douglas Watkinson, Pierre Dumont, Allen Curry, Paul Bentzen, Junbin Zhang, Julien April and Louis Bernatchez Identifying Canadian Freshwater Fishes through DNA Barcodes PLoS ONE 2008-06-18;3(6):e2490 (PDF)
 
  TREE RECONSTRUCTION OF BIN & NEAREST NEIGHBOR:
 

 
 
  HAPLOTYPE NETWORK:
Color & Label Scheme: 
 
 
  COLLECTION LOCATION:
  Countries:
Canada - [45]
United States - [57]
 
 
  DATA MANAGERS:
  Public Data: Private Data:
  Amy C. Driskell - [17]
Ramya Manjunath - [2]
Melanie V. Roy - [3]
Paul Bentzen - [16]
Sujeevan Ratnasingham - [5]
Nicolas Hubert - [9]
Andrew C. Bentley - [1]
Jon Barge - [4]
Student Portal Manager - [3]
Robert G. Young - [1]
Joel Llopiz - [14]
Amy C. Driskell - [7]
Robert Wilson - [6]
Tyler Zemlak - [2]
Danielle Bourque - [20]
 
 
BIN COMPLIANT WITH METADATA REQUIREMENTS

Specimen Images:
  SCFAC616-06 {Alosa aestivalis}
  License:
  License Holder:

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Collection Sites:

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Attribution:
Specimen Depositories:
Biodiversity Institute of Ontario - [6]
Centre for Biodiversity Genomics - [20]
Cornell University - [2]
Dalhousie University - [16]
Environmental Protection Agency, Office of Research and Development, Duluth, MN - [4]
Mined from GenBank, NCBI - [7]
Royal Ontario Museum - [7]
Smithsonian Institution National Museum of Natural History - [30]
University of Kansas, Biodiversity Research Center - [1]
University of New England - [3]
Woods Hole Oceanographic Institution - [14]
 
Sequencing Centers:
Biodiversity Institute of Ontario - [43]
Environmental Protection Agency, Office of Research and Development Cincinnati - [3]
Generic Commercial Labs - [3]
National Research Council (NRC) Saskatoon - [3]
Smithsonian Institution, Laboratories of Analytical Biology - [24]
University of Guelph, Hanner Laboratory - [20]
 
Photography:
Alexander Chen - [1]
CBG Photography Group - [9]
Charlotte Schoelinck - [3]
Deborah Landry - [1]
Katie Connelly - [1]
 
Collectors:
CAISN Network - [1]
D. Clarke - [2]
Emma Libby - [1]
Erling Holm - [2]
HBenoit - [1]
Heath Stone - [2]
Joel Llopiz - [1]
John Hayward - [3]
Julien April - [2]
KConnelly - [1]
Kate A - [1]
Kristen Eugley - [1]
L. Harris - [2]
MN - [3]
MN-DNR staff - Duluth - [3]
Moots - [1]
Northeast Fisheries Science Center - [6]
Paul Bentzen - [5]
Peter Chase NOAA - [3]
Robert Aguilar - [24]
Stephen L. Clifford - [1]
Tom Hurlbut - [2]
USFWS staff - Ashland - [1]
W-MacEarchen - [2]
WI - [1]
William MacEachern - [1]
Willy E. Bemis - [2]
 
Specimen Identification:
Bruce B. Collette - [6]
CBG Collections Unit - [1]
Danielle Bourque - [15]
Erling Holm - [3]
FWS staff - Ashland, WI - [1]
Joel Llopiz - [13]
John Hayward - [3]
Julien April - [1]
Lou Van Guelpen - [3]
MN-DNR staff - Duluth, MN - [3]
Robert Aguilar - [24]
Robert G. Young - [1]
Student - [3]
 
Sequencing Support:
Canadian Barcode of Life Network - [9]
International Barcode of Life (WG1.1) - [3]
 
 

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