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The Public Data Portal supports queries based on taxonomy(scientific names only), geography, attribution fields (i.e. collectors and taxonomists), specimen depositories, project or dataset codes, specimen and sequence identifiers (sampleids, museumids, processed, etc). Free text searches are allowed, the system will try to extract meaningful terms from the search. Search terms should be separated by a space, search terms containing more than one word ("United States" or "Mus musculus") should be wrapped in quotes.
Search examples (Searches are case insensitive):
Culicidae: will return all the mosquitoes in the database
Mammalia Aves: will return all the mammals and birds in the database. Using two terms under the same context (taxonomic in this case), returns all records that match either term.
Aves Peru: will return all the birds collected in Peru. Using two terms under a different context (taxonomic and geographic), returns records that only match both terms.
Hawaii -Chordata: will return all non-chordates, or invertebrates, collected in Hawaii. It is often necessary to exclude records based on a search criteria and is accomplished by adding a minus sign immediately in front of the search term.
"Biodiversity Institute of Ontario" Lepidoptera Florida: will return all moths and butterflies in the Biodiversity Institute of Ontario collection that were collected in Florida. Complex queries are possible by combining multiple search terms.
Search Guidelines:
No spaces in terms when using a multiterm seach (correct: "United States" Mammalia)
Negative symbol (-) is an exclusion operator which must be preceded by a space
If the same term appears in multiple contexts (i.e. "Florida" appears in both the geography list and in "University of Florida"). When using a free text search for the state Florida, employ the context clarification '[geo]' (eg Florida[geo]). Other context clarification tags are [tax], [ids], [inst], [researcher].
Sujeevan Ratnasingham and Paul D. N. Hebert A DNA-Based Registry for All Animal Species: The Barcode Index Number (BIN) System PLoS ONE 2013-07-13;8(7):e66213 (PDF)
Paul D. N. Hebert , Sujeevan Ratnasingham , Evgeny V. Zakharov , Angela C. Telfer , Valerie Levesque-Beaudin , Megan A. Milton , Stephanie Pedersen , Paul Jannetta and Jeremy R. deWaard Counting animal species with DNA barcodes: Canadian insects Philosophical transactions of the royal society b 2016-09-05;371(1702):0-0 (PDF)
Jeremy R. deWaard, Valerie Levesque-Beaudin, Stephanie L. deWaard, Natalia V. Ivanova, Jaclyn T.A. McKeown, Renee Miskie, Suresh Naik, Kate H.J. Perez, Sujeevan Ratnasingham, Crystal N. Sobel, Jayme E. Sones, Claudia Steinke, Angela C. Telfer, Andrew D. Young, Monica R. Young, Evgeny V. Zakharov, and Paul D.N. Hebert Expedited assessment of terrestrial arthropod diversity by coupling Malaise traps with DNA barcoding. Genome 2018-09-26 (PDF)
TREE RECONSTRUCTION OF BIN & NEAREST NEIGHBOR:
HAPLOTYPE NETWORK:
Color & Label Scheme:
COLLECTION LOCATION:
Countries:
Canada - [128]
United States - [44]
DATA MANAGERS:
Public Data:
Private Data:
Jean-Francois Landry - [33] Scott E. Miller - [3] Mat Seidensticker - [8] CBG Project Management Team - [95] Kenneth H Stead - [1] Alex Smith - [1] Chris Looney - [2] Jeremy deWaard - [7]
Jeremy deWaard - [2] Jean-Francois Landry - [4] CBG Project Management Team - [13] Kenneth H Stead - [2] Steven Whitebread - [1]
Canadian National Collection of Insects, Arachnids and Nematodes - [35]
Centre for Biodiversity Genomics - [116]
Research Collection of D. Holden - [4]
Research Collection of Daniel Handfield - [2]
Research Collection of Jeremy deWaard - [1]
Research Collection of Ken Stead - [6]
Research Collection of M. Alex Smith - [1]
Research Collection of Steven Whitebread - [1]
Royal British Columbia Museum - [1]
Smithsonian Institution, National Museum of Natural History - [3]
Washington State Department of Agriculture - [2]
Sequencing Centers:
Centre for Biodiversity Genomics - [126]
Photography:
CBG Photography Group - [22] Daniel Handfield - [2] Hilary Lyttle - [1] Jaclyn McCormick - [2] Jay Cossey - [1] Jean-Francois Landry - [24] Jeremy deWaard - [2] Kristen Mancuso - [2] Lisa Bartels - [1] Richard Wilson - [19] Steven Whitebread - [1] Vazrick Nazari - [9]
Collectors:
A. - [2] A. W. Thomas - [4] A.Borisenko - [2] A.Busck - [1] Alain Charpentier - [2] B. Landry - [1] B. Scholtens - [2] B.C.Schmidt - [2] BIObus 2008 - [2] BIObus 2013 - [1] Becky Nichols - [1] CBG Collections Staff - [33] Chrystal Simon - [1] D Holden - [4] Dave G. Holden - [2] Eric LAGASA - [2] Handfield D. - [2] Heidi Brown - [1] J Brown - [1] J.-F. Landry - [1] J.Cossey - [2] J.F. Landry - [3] J.J.Dombroskie - [2] J.McCormick - [1] J.Sones - [1] JF Landry - [3] Jean-Francois Landry - [12] Josh Palumbo - [2] K.H. Stead - [6] K.H.Stead - [3] K.Perez - [1] Kristina J. Anderson - [1] L Mavin & M Young - [2] L Scott - [3] L. Scott - [1] Li - [2] M.Brown - [8] M.Otway - [1] Mat Seidensticker - [8] P.D.N. Hebert - [3] Parks Canada Staff - [19] R.Wilson - [3] Richard Wilson - [15] S.McCubbin - [2] S.Miller - [1] Steven Whitebread - [1] Tyler Zemlak - [10]
Specimen Identification:
Alex Smith - [1] Allison Brown - [7] Angela Telfer - [1] Anthony W. Thomas - [4] David Adamski - [31] Eric H Lagasa - [2] Evgeny V. Zakharov - [1] Jean-Francois Landry - [5] Jeremy deWaard - [24] Kate Perez - [62] Renee Miskie - [1] Richard L. Wilson - [9] Steven Whitebread - [1]