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Specimen Data Sequences Combined

Barcode Index Number Registry For BOLD:AAA1547

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  BIN DETAILS:
  BIN URI: BOLD:AAA1547 Average Distance: 0.3% (p-dist)
  DOI: Pending Maximum Distance: 2.06% (p-dist)
  Member Count: 297 [290 Public] Distance to Nearest Neighbor: 5.03% (p-dist)
  Barcode Compliant Members: 240
  Founding Record:
 
  NEAREST NEIGHBOR (NN) DETAILS:
  Nearest BIN URI: BOLD:ADW1329 Average Distance: 0.7% (p-dist)
  Member Count: 215 Maximum Distance: 1.82% (p-dist)
  Nearest Member: GMSHK009-11 Distance Variance: 0.19% (p-dist)
  Nearest Member Taxonomy: Chordata, Elasmobranchii, Squaliformes, Squalidae, Squalus, Squalus cubensis 
 
  TAXONOMY:
  Phylum:
Chordata [303]
  Class:
Elasmobranchii [302]
  Order:
Squaliformes [302]
  Family:
Squalidae [298]
  Subfamily:
  Genus:
Squalus [298]
  Species:
Squalus acanthias [260]
Squalus suckleyi [38]
  Subspecies:

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  DISTANCE DISTRIBUTION:
 
  PUBLICATIONS:
  M. R. McCusker, D. Denti, L. Van Guelpen, E. Kenchington and P. Bentzen Barcoding Atlantic Canada's commonly encountered marine fishes Molecular Ecology Resources 2012-12-17;13(2):177-188 (PDF)
  Mabragaña Ezequiel; Díaz de Astarloa Juan Martin; Hanner Robert; Zhang Junbin; González Castro Mariano DNA Barcoding Identifies Argentine Fishes from Marine and Brackish Waters PLoS ONE 2011-12-09;6(12):e28655 (PDF)
  Rd Ward, Fo Costa, Bh Holmes and D Steinke DNA barcoding shared fish species from the North Atlantic and Australasia: minimal divergence for most taxa but a likely two species for both Zeus faber and Lepidopus caudatus Aquatic Biology 2008-07-17;3:71-78 (PDF)
  Sujeevan Ratnasingham and Paul D. N. Hebert A DNA-Based Registry for All Animal Species: The Barcode Index Number (BIN) System PLoS ONE 2013-07-13;8(7):e66213 (PDF)
  THOMAS KNEBELSBERGER, MONICA LANDI, HERMANN NEUMANN, MATTHIAS KLOPPMANN, ANNE F. SELL, PATRICK D. CAMPBELL, SILKE LAAKMANN, MICHAEL J. RAUPACH, GARY R. CARVALHO and FILIPE O. COSTA A reliable DNA barcode reference library for the identification of the North European shelf fish fauna Molecular Ecology Resources 2014-03-12;14(5):1060-1071 (PDF)
  Eugene H.-K. Wong, Mahmood S. Shivji and Robert H. Hanner Identifying sharks with DNA barcodes: assessing the utility of a nucleotide diagnostic approach. Molecular Ecology Resources 2009-01-01;9(S1):243-256 (PDF)
  Dirk Steinke, Tyler S. Zemlak, James A. Boutillier and Paul D. N. Hebert DNA barcoding of Pacific Canada’s fishes Marine Biology 2009-09-01;156(12):2641-2647 (PDF)
 
  TREE RECONSTRUCTION OF BIN & NEAREST NEIGHBOR:
 

 
 
  HAPLOTYPE NETWORK:
Color & Label Scheme: 
 
 
  COLLECTION LOCATION:
  Countries:
Australia - [7]
Canada - [15]
New Zealand - [8]
Argentina - [15]
United States - [48]
Chile - [6]
United Kingdom - [4]
Japan - [5]
Uruguay - [1]
South Africa - [5]
Italy - [85]
Croatia - [74]
North Sea - [5]
Sweden - [2]
France - [3]
Pacific Ocean - [2]
Atlantic Ocean - [1]
 
 
  DATA MANAGERS:
  Public Data: Private Data:
  Sujeevan Ratnasingham - [42]
Fausto Tinti - [137]
Paul Bentzen - [7]
Robert Hanner - [38]
Dirk Steinke - [42]
Student Portal Manager - [1]
Annie M Evankow - [1]
Thomas Knebelsberger - [5]
Juan M. Diaz de Astarloa - [5]
Sharon A. Appleyard - [1]
Ramya Manjunath - [1]
Eugene H. K. Wong - [6]
Abigail Wells - [3]
Philip A. Hastings - [1]
David E. Richardson - [1]
Tyler Zemlak - [2]
Amy C. Driskell - [4]
Robert Hanner - [1]
Von Zum Hof Juergen - [1]
Dirk Steinke - [1]
Matt Lemay - [3]
 
 
BIN COMPLIANT WITH METADATA REQUIREMENTS

Specimen Images:
  FMV096-08 {Squalus suckleyi}
  License:
  License Holder:

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Collection Sites:

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Attribution:
Specimen Depositories:
Biodiversity Institute of Ontario - [5]
CSIRO, Australian National Fish Collection - [23]
Dalhousie University - [7]
Deutsches Zentrum fuer Marine Biodiversitaetsforschung - [5]
Florida State University - [27]
Hakai Institute - [3]
Mined from GenBank, NCBI - [43]
Museum of New Zealand Te Papa Tongarewa - [1]
NOAA, Northeast Fisheries Science Center - [1]
National Institute of Water and Atmospheric Research, Auckland - [1]
National Research Institute of Fisheries Science, Japan - [1]
Ocean Genome Legacy - [1]
Research Collection of Bruce Collette - [2]
Royal British Columbia Museum - [9]
Scripps Institution of Oceanography - [1]
Smithsonian Institution National Museum of Natural History - [4]
South African Institute for Aquatic Biodiversity - [5]
Universidad Nacional de Mar del Plata - [16]
University of Bologna - [137]
University of Kansas, Biodiversity Research Center - [6]
University of New England - [1]
University of Washington, Fish Collection - [3]
 
Sequencing Centers:
Biodiversity Institute of Ontario - [249]
Deutsches Zentrum fuer Marine Biodiversitaetsforschung - [1]
Generic Commercial Labs - [1]
NOAA, NWFSC, Genetics and Evolution Program - [3]
Ocean Genome Legacy - [1]
Smithsonian Institution, Laboratories of Analytical Biology - [4]
 
Photography:
CBG Photography Group - [3]
Deborah Landry - [2]
Dirk Steinke/Tyler Zemlak - [9]
Kyle Hall - [3]
Ocean Genome Legacy - [1]
Thomas Knebelsberger - [5]
 
Collectors:
? - [1]
Andersson - [1]
B Barker (CSIRO) - [1]
B.C. - [9]
D. Clarke - [1]
D. Stevens - [1]
Dept. Experimental & Evolutionary Biology - [137]
Diaz de Astarloa - [10]
F/V Dawn T - [1]
Fano (PU) - [137]
G West (CSIRO) - [1]
Gustavo Aedo - [5]
Ibanez - [1]
Irv Kornfield - [5]
Italy - [137]
JIM WEST - [2]
Jim Boutillier - [9]
Jim Ellis - [4]
K - [1]
K. Graham - [1]
L. Harris - [1]
Laboratory of Marine Biology & Fisheries - [137]
Lei Harris - [1]
M Domeier - [1]
MA - [2]
MADMF - [2]
Marine Sci Center - [1]
Matthias Kloppmann - [1]
Mitsuomi Shimazaki - [3]
NEAMAP Trawl Survey - [2]
Northeast FISHeries Science Center (NEFSC) - [2]
Pacific Biological Station - [9]
Peter Chase NOAA - [2]
Rob Cooper - [5]
Robert Aguilar - [2]
SANDY O`NEILL - [2]
Thomas Knebelsberger - [4]
University of Bologna - [137]
VIMS Trawl Survey - [2]
WDFW personnel - [5]
Washington Dept. Fish and Wildlife - [1]
Woodbridge Marine Disc. Centre - [1]
Woods Hole - [2]
Yasuhiro Ueno - [1]
 
Specimen Identification:
Allan D. Connell - [5]
D. L. Garrett - [2]
Dennis Rutherford - [5]
Ezequiel Mabragana - [5]
Fausto Tinti - [137]
Graham E. Gillespie - [4]
Juan M. Diaz de Astarloa - [10]
Lou Van Guelpen - [1]
Philip A. Hastings - [1]
Robert Aguilar - [4]
Shenenjian - [1]
Student - [1]
Theodore W. Pietsch - [1]
Thomas Knebelsberger - [5]
William White - [2]
 
Sequencing Support:
Canadian Barcode of Life Network - [17]
International Barcode of Life (WG1.1) - [146]
 
 

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