The Public Data Portal supports queries based on taxonomy(scientific names only), geography, attribution fields (i.e. collectors and taxonomists), specimen depositories, project or dataset codes, specimen and sequence identifiers (sampleids, museumids, processed, etc). Free text searches are allowed, the system will try to extract meaningful terms from the search. Search terms should be separated by a space, search terms containing more than one word ("United States" or "Mus musculus") should be wrapped in quotes.
Search examples (Searches are case insensitive):
Culicidae: will return all the mosquitoes in the database
Mammalia Aves: will return all the mammals and birds in the database. Using two terms under the same context (taxonomic in this case), returns all records that match either term.
Aves Peru: will return all the birds collected in Peru. Using two terms under a different context (taxonomic and geographic), returns records that only match both terms.
Hawaii -Chordata: will return all non-chordates, or invertebrates, collected in Hawaii. It is often necessary to exclude records based on a search criteria and is accomplished by adding a minus sign immediately in front of the search term.
"Biodiversity Institute of Ontario" Lepidoptera Florida: will return all moths and butterflies in the Biodiversity Institute of Ontario collection that were collected in Florida. Complex queries are possible by combining multiple search terms.
Search Guidelines:
No spaces in terms when using a multiterm seach (correct: "United States" Mammalia)
Negative symbol (-) is an exclusion operator which must be preceded by a space
If the same term appears in multiple contexts (i.e. "Florida" appears in both the geography list and in "University of Florida"). When using a free text search for the state Florida, employ the context clarification '[geo]' (eg Florida[geo]). Other context clarification tags are [tax], [ids], [inst], [researcher].
Matthias F. Geiger, Jerome Moriniere, Axel Hausmann, Gerhard Haszprunar, Wolfgang Wägele, Paul D.N. Hebert & Björn Rulik Testing the Global Malaise Trap Program – How well does the current barcode reference library identify flying insects in Germany? Biodiversity Data Journal 2016-12-01;4(e10671):1-22 (PDF)
Babes-Bolyai University, Department of Biology and Ecology - [1]
Centre for Biodiversity Genomics - [2]
Finnish Museum of Natural History, Zoological Museum - [2]
Mined from GenBank, NCBI - [2]
Museum national d'Histoire naturelle - [1]
Natural History Museum, London - [2]
Naturalis Biodiversity Center - [2]
Naturhistorisches Museum Wien - [4]
Norwegian Institute for Nature Research - [2]
Research Center in Biodiversity and Genetic Resources - [1]
SNSB, Zoologische Staatssammlung Muenchen - [3]
Senckenberg Natural History Collections Dresden, Museum of Zoology - [1]
Slovak Academy of Sciences, Plant Science and Biodiversity Centre - [3]
University of Bergen, Natural History Collections - [2]
University of Osijek - [1]
University of Oslo, Natural History Museum - [3]
Wellcome Sanger Institute - [1]
Zoologisches Forschungsmuseum Alexander Koenig - [14]
Sequencing Centers:
Beijing Genomics Institute - [14] Centre for Biodiversity Genomics - [17] Macrogen, Europe - [4] Natural History Museum, London - [1] Naturalis Biodiversity Center - [2]
Photography:
Aina Maerk Aspaas - [2] Anna Lempiainen - [2] CBG Robotic Rig - [2] Jenni Moilanen - [1] Kristian B. Kristiansen - [3] Linn Hagenlund - [2] Lujza Keresztes - [1] Naturalis DNA barcoding facility - [2] Patrik Macko - [3] Sabine Schoder - [2] Sanger BIOSCAN Team - [1] Schoder S. - [4] Stjepan Krcmar - [2] Thomas Lebard - [1] ZSM Hymenoptera Photography Group - [2]
Collectors:
Antti Haarto - [1] Deirdre Kerdraon - [1] Elias de Bree - [1] Fedor Ciampor - [3] Frode Odegaard - [2] G. Aase - [2] G. Sellmayer - [1] GBOL-Team SNSD - [1] GBOL-Team ZFMK - [14] Gaia Banelyte - [1] Jaap van der Linden - [1] Jere Kahanpaeae - [1] Jones Laura - [1] Krcmar S. - [1] Mr Andrew Grayson - [1] Neryse Mably - [1] Nikolaus - [4] O. Sorlibraten - [1] Remy Wood - [1] Rikmyrprosjektet - [2] Robert Wolton - [1] Rui Andrade - [1] Szucsich - [4] T. J. Olsen - [2] Terec A. - [1] Thomas Lebard - [1] W. Schacht - [2] Zuzana Ciamporova-Zatovicova - [3]
Specimen Identification:
Andre Reimann - [1] Andrew Grayson - [1] Antti Haarto - [1] BOLD Identification System [2022] - [2] BOLD Identification System [] - [1] Christian Schmidt - [1] Elias De Bree - [1] Frode Odegaard - [2] Jaap Van Der Linden - [1] Jere Kahanpaa - [1] Juergen Esser - [8] Juergen Kappert - [5] Lujza Keresztes - [1] Morten Falck - [3] Nikolaus U Szucsich - [4] Robert Wolton - [1] Rui Andrade - [1] Stein Skoglund Skatoy - [2] Stjepan Krcmar - [1] Thomas Lebard - [1] Wolfgang Schacht - [2]