The Public Data Portal supports queries based on taxonomy(scientific names only), geography, attribution fields (i.e. collectors and taxonomists), specimen depositories, project or dataset codes, specimen and sequence identifiers (sampleids, museumids, processed, etc). Free text searches are allowed, the system will try to extract meaningful terms from the search. Search terms should be separated by a space, search terms containing more than one word ("United States" or "Mus musculus") should be wrapped in quotes.
Search examples (Searches are case insensitive):
Culicidae: will return all the mosquitoes in the database
Mammalia Aves: will return all the mammals and birds in the database. Using two terms under the same context (taxonomic in this case), returns all records that match either term.
Aves Peru: will return all the birds collected in Peru. Using two terms under a different context (taxonomic and geographic), returns records that only match both terms.
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"Biodiversity Institute of Ontario" Lepidoptera Florida: will return all moths and butterflies in the Biodiversity Institute of Ontario collection that were collected in Florida. Complex queries are possible by combining multiple search terms.
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Gontran Sonet, Kurt Jordaens, Yves Braet, Luc Bourguignon, Erena Dupont, Thierry Backeljau, Marc de Meyer and Stijn Desmyter Utility of GenBank and the Barcode of Life Data Systems (BOLD) for the identification of forensically important Diptera from Belgium and France ZooKeys 2013-12-30;365:307-328 (PDF)
Tenielle Cooke, Kyle Kulenkampff, Marise Heyns, and Laura Jane Heathfield DNA barcoding of forensically important flies in the Western Cape, South Africa Genome 2018-09-24 (PDF)
Wells,JD,J D;Sperling,FA,F A Molecular phylogeny of Chrysomya albiceps and C. rufifacies (Diptera: Calliphoridae). Journal of Medical Entomology 1999-05-01;36(3):222-6
Farinha, Ana; Dourado, Catarina G; Centeio, Neiva; Oliveira, Ana Rita; Dias, Deodalia; Rebelo, Maria Teresa Small bait traps as accurate predictors of dipteran early colonizers in forensic studies Journal of Insect Science 2014-05-30;14(77):16 (PDF)
Harvey,ML,M L;Mansell,MW,M W;Villet,MH,M H;Dadour,IR,I R Molecular identification of some forensically important blowflies of southern Africa and Australia. Medical and Veterinary Entomology 2003-12-01;17(4):363-9
TREE RECONSTRUCTION OF BIN & NEAREST NEIGHBOR:
HAPLOTYPE NETWORK:
Color & Label Scheme:
COLLECTION LOCATION:
Countries:
South Africa - [18]
Zimbabwe - [2]
Eswatini - [3]
Argentina - [10]
Brazil - [11]
Portugal - [62]
Pakistan - [2]
Colombia - [8]
Uruguay - [1]
France - [6]
Belgium - [1]
Ecuador - [27]
Egypt - [14]
Romania - [2]
Spain - [140]
Germany - [2]
Saudi Arabia - [8]
Equatorial Guinea - [3]
Lebanon - [10]
Italy - [4]
Gabon - [4]
Israel - [1]
Algeria - [12]
Tanzania - [1]
Nigeria - [1]
Poland - [1]
Peru - [1]
Iraq - [4]
Malaysia - [3]
Turkey - [3]
Unrecoverable - [3]
DATA MANAGERS:
Public Data:
Private Data:
Cecilia Kopuchian - [5] Julian Padro - [1] Marcela K. Castelo - [4] Mailyn Gonzalez - [5] Ana B Garcia Ruilova - [27] Charles S Walker - [291] Gontran Sonet - [7] Sonia AF Ferreira - [2] Stefan Schmidt - [1] Kyle S Kulenkampff - [10] Ana C.O. Farinha - [1] CBG Project Management Team - [6] Mateus Pepinelli - [11] CBG Collections Unit - [4]
Mailyn Gonzalez - [1] Tyler Kartzinel - [6] Andrea Pinos - [1] Alberto AFL Fuentes lopez - [38] Kyle S Kulenkampff - [3] Stefan Schmidt - [1] Charles S Walker - [3] Jaiber Solano - [2] Drashti RAMESH Parmar - [1] CBG Collections Unit - [1]
Instituto de Investigacion de Recursos Biologicos Alexander von Humboldt - [6]
Julius-Maximilians-Universitat Wuerzburg - [1]
Mined from GenBank, NCBI - [289]
Museo Argentino de Ciencias Naturales, Bernardino Rivadavia - [10]
National Institute for Biotechnology and Genetic Engineering - [1]
National Institute of Criminalistics and Criminology, Belgium - [7]
Nicolaus Copernicus University - [1]
Pontificia Universidad Catolica del Ecuador - [5]
Pontificia Universidad Catolica del Ecuador, Museo de Zoologia - [8]
Research Center in Biodiversity and Genetic Resources - [2]
SNSB, Zoologische Staatssammlung Muenchen - [2]
Universidad Tecnica Particular de Loja - [14]
Universidad de Murcia - [38]
Universidad del Magdalena, Grupo de Investigacion en Evolucion, Sistematica y Ecologia Molecular - [2]
Universidade Federal de Mato Grosso do Sul - [11]
Universidade de Lisboa, Faculdade de Ciencias - [1]
University of Cape Town, Division of Forensic Science and Toxicology - [13]
Sequencing Centers:
Centre for Biodiversity Genomics - [50] Royal Belgian Institute of Natural Sciences - [7] SNSB, Zoologische Staatssammlung Muenchen - [1] University of Cape Town, Division of Forensic Science and Toxicology - [13]
Photography:
Antonia Abels - [1] CBG Robotic Rig - [2] Hymenoptera Photo Group - [2] K.S. Kulenkampff - [9] M. Z. Rehman - [1] Mariela Domínguez - [38] Miguel Jurado - [32] Molly Magid - [4] Nicolas Flaibani - [5] Paula Florencia Zermoglio, Jose Emilio Crespo - [2] Sylvia Grune Loffler - [5] Tatiana H. Rivas - [1] Tenielle M. Cooke - [18] Wilber Lopez - [7]
Collectors:
A. Abels - [1] A. Barragan - [2] Abeer M. Salem - [10] Alberto Fuentes-Lopez - [38] Ana C. O. Farinha - [1] Anita Belen Garcia - [14] Benoit Vincent - [6] Biomonitores - [1] Carlos Lopez-Vaamonde - [4] Caroline Chimeno - [1] Castelo MK - [3] De Panis D - [1] Dr. Naeem Shahwani - [1] E. Moreno - [2] Etai Kahana - [1] Fontanarrosa P - [1] Gonzalez M - [1] Grupo Biomonitores - [5] Hannah O` Sullivan - [3] JE Crespo - [3] Jehanara - [1] Jeremy deWaard - [4] Jose Emilio Crespo - [1] Joseph Hubert Masoy - [1] KS Kulenkampff - [3] Krtizen Breski - [3] Krzysztof Szpila & Soszynska-Maj - [1] Labo MIC - [1] Lavinia Iancu - [1] M. Heyns - [10] ME Barrantes y PF Zermoglio - [3] Mariela Dominguez - [5] Marta Wolff - [2] Mirian Silveria de Souza - [11] Natalia Veiga - [5] O.El-Ansary - [1] Padro J - [1] Rui Andrade - [2] S. Aguirre - [4] Saint Esteven A - [1] Samy Zalat - [2] Vrdoljak J - [1] unknown - [1]
Specimen Identification:
Alberto AFL Fuentes lopez - [38] Alejandro Saint Esteven - [1] Ana B Garcia Ruilova - [14] Ana C.O. Farinha - [1] Analia R. Diaz - [5] Antonia Abels - [1] BOLD Identification System [2016] - [1] Benoit Vincent - [6] CBG Taxonomy Unit - [9] Caroline Chimeno - [1] Emilia Moreno - [8] Huertas Rivas T. - [1] Jerome Moriniere - [1] Krzysztof Szpila - [1] Kyle S Kulenkampff - [3] Mariela Dominguez - [5] Marise Heyns - [10] Marta Wolff - [2] Mirian Silveria - [11] Muhammad Ashfaq - [1] Paula F. Zermoglio - [4] Rui Andrade - [2] Valerie Levesque-Beaudin - [6] Wilber Lopez - [5] Yves Braet - [1]