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The Public Data Portal supports queries based on taxonomy(scientific names only), geography, attribution fields (i.e. collectors and taxonomists), specimen depositories, project or dataset codes, specimen and sequence identifiers (sampleids, museumids, processed, etc). Free text searches are allowed, the system will try to extract meaningful terms from the search. Search terms should be separated by a space, search terms containing more than one word ("United States" or "Mus musculus") should be wrapped in quotes.
Search examples (Searches are case insensitive):
Culicidae: will return all the mosquitoes in the database
Mammalia Aves: will return all the mammals and birds in the database. Using two terms under the same context (taxonomic in this case), returns all records that match either term.
Aves Peru: will return all the birds collected in Peru. Using two terms under a different context (taxonomic and geographic), returns records that only match both terms.
Hawaii -Chordata: will return all non-chordates, or invertebrates, collected in Hawaii. It is often necessary to exclude records based on a search criteria and is accomplished by adding a minus sign immediately in front of the search term.
"Biodiversity Institute of Ontario" Lepidoptera Florida: will return all moths and butterflies in the Biodiversity Institute of Ontario collection that were collected in Florida. Complex queries are possible by combining multiple search terms.
Search Guidelines:
No spaces in terms when using a multiterm seach (correct: "United States" Mammalia)
Negative symbol (-) is an exclusion operator which must be preceded by a space
If the same term appears in multiple contexts (i.e. "Florida" appears in both the geography list and in "University of Florida"). When using a free text search for the state Florida, employ the context clarification '[geo]' (eg Florida[geo]). Other context clarification tags are [tax], [ids], [inst], [researcher].
Matthias F. Geiger, Jerome Moriniere, Axel Hausmann, Gerhard Haszprunar, Wolfgang WΓ€gele, Paul D.N. Hebert & BjΓΆrn Rulik Testing the Global Malaise Trap Program β How well does the current barcode reference library identify flying insects in Germany? Biodiversity Data Journal 2016-12-01;4(e10671):1-22 (PDF)
TREE RECONSTRUCTION OF BIN & NEAREST NEIGHBOR:
HAPLOTYPE NETWORK:
Color & Label Scheme:
COLLECTION LOCATION:
Countries:
Greece - [2]
Serbia - [6]
Kyrgyzstan - [1]
Germany - [37]
Morocco - [2]
Spain - [4]
Norway - [6]
Russia - [5]
Finland - [7]
United Kingdom - [8]
Sweden - [3]
Bulgaria - [1]
Netherlands - [1]
Kazakhstan - [1]
Hungary - [1]
Portugal - [1]
France - [3]
Austria - [7]
Georgia - [3]
Italy - [2]
Slovakia - [1]
Lebanon - [1]
Poland - [1]
DATA MANAGERS:
Public Data:
Private Data:
Tomasz Mamos - [1] Thibaud Decaens - [2] CBG Project Management Team - [2] Jeffrey H Skevington - [13] Ximo Mengual - [3] Charles S Walker - [10] Nikolaus U Szucsich - [5] Bjoern Rulik - [5] Sonia AF Ferreira - [1] Cuong Q Tang - [1] Stefan Schmidt - [6] Sean W. Prosser - [1] Jorg Spelda - [1] Lars Hendrich - [1] Ladislav Roller - [1] Matthew P Besley - [1] Helge M Heimburg - [2] Torbjorn Ekrem - [3] Gunilla Stahls - [4]
Bjoern Rulik - [21] Jeffrey H Skevington - [10] Andrea Chiocchio - [1] Sonia AF Ferreira - [1] Lars Hendrich - [2] Andrew Lucas - [4] Stefan Schmidt - [1] Oscar Vorst - [1] Marko Mutanen - [3] Stefano Scalercio - [1] CBG Collections Unit - [3]
BIN COMPLIANT WITH METADATA REQUIREMENTS
Specimen Images:
FIDIP275-11 {Scaeva pyrastri}
License:
CreativeCommons Attribution NonCommercial No Derivatives (2011)
Canadian National Collection of Insects, Arachnids and Nematodes - [21]
Centre for Biodiversity Genomics - [3]
Finnish Museum of Natural History, Zoological Museum - [4]
Haus der Natur, Salzburg - [2]
Landesmuseum Kaernten - [2]
Mined from GenBank, NCBI - [11]
NTNU University Museum, Department of Natural History - [5]
National Museum Wales - [4]
Natural History Museum, London - [2]
Naturalis Biodiversity Center - [1]
Naturhistorisches Museum Wien - [3]
Research Center in Biodiversity and Genetic Resources - [1]
SNSB, Zoologische Staatssammlung Muenchen - [11]
Slovak National Museum, Natural History Museum - [1]
Universita di Firenze, Department of Biology - [1]
Universite de Montpellier - [2]
University of Alicante - [1]
University of Lodz, Department of Invertebrate Zoology and Hydrobiology - [1]
University of Oulu - [3]
University of Tuscia, Department of Ecological and Biological Sciences - [1]
York University, Packer Collection - [1]
Zoologisches Forschungsmuseum Alexander Koenig - [30]
Sequencing Centers:
Beijing Genomics Institute - [20] Canadian Centre for DNA Barcoding - [1] Centre for Biodiversity Genomics - [44] Macrogen, Europe - [1] Microsynth AG - [1] Natural History Museum, London - [1] Naturalis Biodiversity Center - [1] SNSB, Zoologische Staatssammlung Muenchen - [3] Swansea University - [4]
Photography:
A Lucas - [8] Anna Lempiainen - [2] CBG Photography Group - [1] CBG Robotic Rig - [4] Chad Whitmell - [6] Charlotte EIBES - [1] Helge Heimburg - [4] Joerg Spelda - [2] Marek Semelbauer - [1] Marie Minmeister - [1] Marjo Heikkinen - [3] Piia Partanen - [3] Rene Chabot - [3] Sabine Schoder - [3] Schoder S. - [4] Sondre Dahle - [3] ZSM Hymenoptera Photography Group - [1]
Collectors:
A Lucas - [3] A. Eriksen - [1] A. Laugsand - [1] Antti Haarto - [4] B.Harding - [1] Bonifacino - [1] C. Eibes - [1] C.Kassebeer - [2] Chiara Martino - [1] D. - [6] D. Westmoreland - [1] Dan Bock - [1] Doczkal - [6] Dr Robert Wolton - [1] Eugenio Potito - [1] F. Odegaard - [1] F. Odegaard & O. Hanssen - [2] G. Sellmayer - [1] GBOL-Team ZFMK - [21] Giuseppe Martino - [1] Haseke - [1] Heimburg H. - [1] I. Iliev - [1] J Skevington - [2] J&R Skevington - [1] J. - [4] J. Skevington - [6] J.H. Skevington - [3] J.R.Vockeroth - [2] Joerg Spelda - [2] Kees Goudsmits - [1] L.R. Best - [1] M. Minmeister - [1] M. Piepenbrink - [3] M. Semelbauer - [1] Magda Bou Dagher Kharrat - [1] Marco - [1] Martyna Pasik - [1] Mengual - [3] Mutin - [1] Nikolaus - [5] O.Ermakov - [1] Remschak - [1] Rory O`Connor - [1] Rui Andrade - [1] Rulik et al - [5] S. & Voith - [4] S. Bot - [1] Sander Bot - [1] Schmidt - [4] Szucsich - [5] T.Nielsen - [1] V.Vekhnik - [1] W. Schacht - [1] Wieser C. - [1] X. - [3] Zorica Nedeljkovic - [1] leg. ZFMK Neusiedler See Exkursion Participants - [1]
Specimen Identification:
Andre Reimann - [1] Andrew Lucas - [4] Anna Lena Mueller - [1] Antti Haarto - [4] Axel Ssymank - [4] B. Harding - [1] BOLD Machine Learning Tool Kit - [2] Bernd Nickel - [1] Bjoern Rulik - [1] C. Kassebeer - [2] Charlotte Eibes - [1] Christian F. Kassebeer - [1] Christian Kehlmaier - [1] Dieter Doczkal - [6] Hans-Georg Rudzinski - [1] Helge M Heimburg - [2] J. R. Vockeroth - [2] Jeffrey H Skevington - [10] Jerome Moriniere - [1] Jorg Spelda - [2] Juergen Esser - [5] Kate Perez - [7] Kees Goudsmits - [1] M. M. Locke - [2] M. Semelbauer - [1] Marco Bonifacino - [1] Marie Minmeister - [1] Michelle Locke - [2] Nikolaus U Szucsich - [5] Robert Wolton - [1] Roger K. A. Morris - [1] Rui Andrade - [1] Sander Bot - [1] Teresa Bonacci - [1] Tore R. Nielsen - [4] Wolfgang Schacht - [1] Ximo Mengual - [8] Zorica Nedeljkovic - [1]