The Public Data Portal supports queries based on taxonomy(scientific names only), geography, attribution fields (i.e. collectors and taxonomists), specimen depositories, project or dataset codes, specimen and sequence identifiers (sampleids, museumids, processed, etc). Free text searches are allowed, the system will try to extract meaningful terms from the search. Search terms should be separated by a space, search terms containing more than one word ("United States" or "Mus musculus") should be wrapped in quotes.
Search examples (Searches are case insensitive):
Culicidae: will return all the mosquitoes in the database
Mammalia Aves: will return all the mammals and birds in the database. Using two terms under the same context (taxonomic in this case), returns all records that match either term.
Aves Peru: will return all the birds collected in Peru. Using two terms under a different context (taxonomic and geographic), returns records that only match both terms.
Hawaii -Chordata: will return all non-chordates, or invertebrates, collected in Hawaii. It is often necessary to exclude records based on a search criteria and is accomplished by adding a minus sign immediately in front of the search term.
"Biodiversity Institute of Ontario" Lepidoptera Florida: will return all moths and butterflies in the Biodiversity Institute of Ontario collection that were collected in Florida. Complex queries are possible by combining multiple search terms.
Search Guidelines:
No spaces in terms when using a multiterm seach (correct: "United States" Mammalia)
Negative symbol (-) is an exclusion operator which must be preceded by a space
If the same term appears in multiple contexts (i.e. "Florida" appears in both the geography list and in "University of Florida"). When using a free text search for the state Florida, employ the context clarification '[geo]' (eg Florida[geo]). Other context clarification tags are [tax], [ids], [inst], [researcher].
Paul D. N. Hebert , Sujeevan Ratnasingham , Evgeny V. Zakharov , Angela C. Telfer , Valerie Levesque-Beaudin , Megan A. Milton , Stephanie Pedersen , Paul Jannetta and Jeremy R. deWaard Counting animal species with DNA barcodes: Canadian insects Philosophical transactions of the royal society b 2016-09-05;371(1702):0-0 (PDF)
Matthias F. Geiger, Jerome Moriniere, Axel Hausmann, Gerhard Haszprunar, Wolfgang WΓ€gele, Paul D.N. Hebert & BjΓΆrn Rulik Testing the Global Malaise Trap Program β How well does the current barcode reference library identify flying insects in Germany? Biodiversity Data Journal 2016-12-01;4(e10671):1-22 (PDF)
TREE RECONSTRUCTION OF BIN & NEAREST NEIGHBOR:
HAPLOTYPE NETWORK:
Color & Label Scheme:
COLLECTION LOCATION:
Countries:
Canada - [41]
Pakistan - [39]
Lebanon - [1]
United States - [14]
Spain - [4]
Finland - [18]
United Kingdom - [10]
Norway - [5]
Serbia - [5]
Germany - [46]
Netherlands - [12]
Israel - [1]
Portugal - [4]
Sweden - [5]
France - [5]
Austria - [4]
India - [5]
Georgia - [3]
China - [17]
Slovakia - [1]
Italy - [1]
Ukraine - [3]
Unrecoverable - [3]
DATA MANAGERS:
Public Data:
Private Data:
Camille Le Roy - [2] CBG Collections Unit - [9] Charles S Walker - [8] Oleksandr I. Zinenko - [3] CBG Project Management Team - [39] Bjoern Rulik - [1] Beverly Mcclenaghan - [1] Sonia AF Ferreira - [3] Dirk Steinke - [5] Ximo Mengual - [3] Nikolaus U Szucsich - [3] Jeffrey H Skevington - [6] Rodolphe Rougerie - [2] Helge M Heimburg - [1] Gunilla Stahls - [3] Ladislav Roller - [1] Matthew P Besley - [2] Mindi Summers - [1] Ben W Price - [1] Paolo Biella - [1] Sean W. Prosser - [1] Torbjorn Ekrem - [2] Jeremy deWaard - [1] Piotr Gadawski - [1]
Patricia L Jones - [2] CBG Collections Unit - [31] Camille Le Roy - [2] Jeffrey H Skevington - [14] Zhang Tingting - [5] Oscar Vorst - [5] CBG Project Management Team - [2] Andrew Lucas - [1] Bjoern Rulik - [50] Marcel Polling - [3] Marko Mutanen - [15] Matthew P Besley - [1] Lyndall Pereira da Conceicoa - [4] Charles S Walker - [5] Colin Favret - [1] Fei Mo - [10]
Canadian National Collection of Insects, Arachnids and Nematodes - [16]
Centre for Biodiversity Genomics - [80]
China Agricultural University - [10]
Finnish Museum of Natural History, Zoological Museum - [1]
Landesmuseum Kaernten - [1]
Mined from GenBank, NCBI - [14]
Museum national d'Histoire naturelle - [2]
NTNU University Museum, Department of Natural History - [5]
National Institute for Biotechnology and Genetic Engineering - [4]
National Museum Wales - [1]
Natural History Museum, London - [4]
Naturalis Biodiversity Center - [5]
Naturhistorisches Museum Wien - [3]
Private Collection of Iiro Kakko - [2]
Research Center in Biodiversity and Genetic Resources - [3]
Shandong Agricultural University - [5]
Slovak National Museum, Natural History Museum - [1]
Universite de Montreal, Institut de Recherche en Biologie Vegetale, Ouellet-Robert Entomological Collection - [1]
University of Calgary - [1]
University of Guelph - [1]
University of Lodz, Department of Invertebrate Zoology and Hydrobiology - [1]
University of Manitoba, Wallis Roughley Museum of Entomology - [3]
University of Milano Bicocca - [1]
University of Oulu - [15]
V. N. Karazin Kharkiv National University - [3]
Wageningen University and Research - [7]
Wellcome Sanger Institute - [4]
Zoologisches Forschungsmuseum Alexander Koenig - [55]
Sequencing Centers:
Beijing Genomics Institute - [50] Canadian Centre for DNA Barcoding - [1] Centre for Biodiversity Genomics - [82] China Agricultural University - [4] Macrogen, Europe - [3] Microsynth AG - [1] Natural History Museum, London - [2] Naturalis Biodiversity Center - [5] Swansea University - [1] University of Calgary - [1]
Photography:
A. Lucas - [2] Alison Forde - [2] CBG Photography Group - [10] CBG Robotic Imager - [1] CBG Robotic Rig - [40] Camille Le Roy - [4] Chad Whitmell - [4] Fei Mo - [4] Jaclyn McCormick - [6] Jay Cossey - [2] Jenni Moilanen - [1] Julien Piolain - [1] Kati Tran - [4] Libby Avis - [8] Marek Semelbauer - [1] Marjo Heikkinen - [15] Naturalis DNA barcoding facility - [4] Rick Turner - [3] Sabine Schoder - [1] Saleem Akhtar - [4] Sanger BIOSCAN Team - [3] Schoder S. - [2] Sondre Dahle - [2] Spencer Walker - [1] Thomas Lebard - [1] sun chentao - [10]
Collectors:
A. Baker - [1] A. Laugsand - [1] A.K.Walker - [1] Aija White - [1] Allan Woodhouse - [1] Austin; Laine - [2] B. - [1] B. Maples - [1] B. McClenaghan - [1] B. Smith - [1] B.Harding - [1] BIO Team - [1] BIObus 2009 - [7] BIObus 2010 - [4] BIObus 2013 - [1] Baker - [2] Benitez-Bosco L - [1] Bill Urwin - [1] Biobus 2011 - [8] Camille Le Roy - [4] Chrystal Simon - [1] Claire Carvell - [1] Dan Bock - [1] Dr Mike Ashworth - [1] Dr. Akhtar Rasool - [28] Ekrem T - [1] Ekrem TS - [1] Ellen Richard - [5] Ellie Grove - [1] Etai Kahana - [1] F. Lazarus - [1] F. Odegaard & O. Hanssen - [2] Fei Mo - [10] Ferreira S - [1] Fred Giles - [1] G.E.Shewell - [1] GBOL-Team ZFMK - [50] GGBC members et al. - [1] Gadawski P - [1] H. - [1] Heimburg - [1] Hodunko R - [1] I.Carmichael - [1] Iiro Kakko - [2] J Skevington - [3] J&R Skevington - [2] J. Cossey - [1] J. Laine - [1] J. Skevington - [3] J. Webb - [1] J.H. Skevington - [1] J.Skevington - [1] James Sones - [1] Jere Kahanpaeae - [1] Jesse; Tang - [2] Kees Goudsmits - [1] Koblmueller - [1] L. Avis - [5] L.Bartels - [1] LIAM CROWLEY - [1] Leg. E. Corts - [1] M A Hannan - [3] M. & Thormann - [1] M. Piepenbrink - [15] M. Seal - [1] M. Semelbauer - [1] Malek Kalboussi - [1] Marcel Polling - [3] Martin R - [1] Mengual - [2] Mike Ashworth - [1] Miles Zhang - [1] Miss Aheeba Malik - [28] Mr. Ikram Ullah - [28] NHMLAC - [1] Nadine Mitschunas - [1] Naila Nazir Khan - [2] Nathan - [1] Nathan; Reyes - [1] Nazir Ahmed - [1] Nikolaus - [1] Nina Villing - [3] P. Kevan - [1] Paolo Biella - [1] Paul Hebert - [1] R. Avis - [5] Rabl - [1] Rui Andrade - [3] Rulik et al - [1] S Plummer - [1] S. Akhtar - [4] S. Fazal - [4] S. Korneyev - [1] Sander Bot - [5] Shuyi Zhang - [6] Stefan - [1] Stephan - [1] Stuart Warrington - [2] Stur E - [1] Sue Taylor - [1] Sun Chentao - [5] Sylvia - [1] Szucsich - [1] Thomas Lebard - [1] Thomas Lebard & Marie Canut - [1] Turaccio P - [1] Wim Dimmers - [3] X. - [1] X. & Espeland - [1] Yuliia Guglya - [3] Zhunan Zhao - [6]
Specimen Identification:
Aija F White - [1] Andre Reimann - [5] Andrew Lucas - [1] Anke Schaefer - [1] Axel Ssymank - [4] B. Harding - [1] BOLD ID Engine - [1] BOLD Identification System [2017] - [1] BOLD Identification System [2019] - [1] BOLD Identification System [2023] - [5] BOLD Identification System [] - [4] BOLD Machine Learning Tool Kit - [6] Bernd Nickel - [4] CBG Taxonomy Unit - [1] Chentao Sun - [5] Christian F. Kassebeer - [10] Dirk Steinke - [5] Fei Mo - [10] Hans-Georg Rudzinski - [1] Helge M Heimburg - [1] I. Carmichael - [1] Iiro Kakko - [2] J. Flinck - [1] Jeffrey H Skevington - [14] Juergen Esser - [14] Juergen Kappert - [2] Julie K. Stahlhut - [1] Kees Goudsmits - [1] Libby Avis - [5] Linde Slikboer - [3] M. Semelbauer - [1] Malek Kalboussi - [1] Mike Ashworth - [1] Muhammad Ashfaq - [4] Nikolaus U Szucsich - [2] Paolo Biella - [1] Paul D.N. Hebert - [8] Piotr Gadawski - [1] Renee Miskie - [2] Rui Andrade - [3] Ryan Mitchell - [1] Sander Bot - [5] Stefan Rabl - [1] Sue Taylor - [1] Thomas Lebard - [2] Tore R. Nielsen - [2] Valerie Levesque-Beaudin - [4] Ximo Mengual - [12] Yuliia Guglya - [3]