The Public Data Portal supports queries based on taxonomy(scientific names only), geography, attribution fields (i.e. collectors and taxonomists), specimen depositories, project or dataset codes, specimen and sequence identifiers (sampleids, museumids, processed, etc). Free text searches are allowed, the system will try to extract meaningful terms from the search. Search terms should be separated by a space, search terms containing more than one word ("United States" or "Mus musculus") should be wrapped in quotes.
Search examples (Searches are case insensitive):
Culicidae: will return all the mosquitoes in the database
Mammalia Aves: will return all the mammals and birds in the database. Using two terms under the same context (taxonomic in this case), returns all records that match either term.
Aves Peru: will return all the birds collected in Peru. Using two terms under a different context (taxonomic and geographic), returns records that only match both terms.
Hawaii -Chordata: will return all non-chordates, or invertebrates, collected in Hawaii. It is often necessary to exclude records based on a search criteria and is accomplished by adding a minus sign immediately in front of the search term.
"Biodiversity Institute of Ontario" Lepidoptera Florida: will return all moths and butterflies in the Biodiversity Institute of Ontario collection that were collected in Florida. Complex queries are possible by combining multiple search terms.
Search Guidelines:
No spaces in terms when using a multiterm seach (correct: "United States" Mammalia)
Negative symbol (-) is an exclusion operator which must be preceded by a space
If the same term appears in multiple contexts (i.e. "Florida" appears in both the geography list and in "University of Florida"). When using a free text search for the state Florida, employ the context clarification '[geo]' (eg Florida[geo]). Other context clarification tags are [tax], [ids], [inst], [researcher].
Gergin A. Blagoev, Jeremy R. DeWaard, Sujeevan Ratnasingham, Stephanie L. DeWaard, Liuqiong Lu, James Robertson, Angela C. Telfer, Paul D. N. Hebert Untangling taxonomy: a DNA barcode reference library for Canadian spiders Molecular Ecology Resources 2015-07-26;16(1):325-341 (PDF)
Nadia A. Ayoub, Susan E. Riechert and Randall L. Small Speciation history of the North American funnel web spiders, Agelenopsis (Araneae: Agelenidae): phylogenetic inferences at the population-species interface. Molecular Phylogenetics and Evolution 2005-07-01;36(1):42-57 (PDF)
Angela C Telfer, Monica R Young, Jenna Quinn, Kate Perez, Crystal N Sobel, Jayme E Sones, Valerie Levesque-Beaudin, Rachael Derbyshire, Jose Fernandez-Triana, Rodolphe Rougerie, Paul D N Hebert, Jeremy R deWaard and contributors. Biodiversity inventories in high gear: DNA barcoding facilitates a rapid biotic survey of a temperate nature reserve Biodiversity Data Journal 2015-08-30;3(e6313):1-176 (PDF)
TREE RECONSTRUCTION OF BIN & NEAREST NEIGHBOR:
HAPLOTYPE NETWORK:
Color & Label Scheme:
COLLECTION LOCATION:
Countries:
Canada - [234]
United States - [22]
Russia - [3]
DATA MANAGERS:
Public Data:
Private Data:
Claudia Copley - [3] CBG Project Management Team - [240] Charles S Walker - [9] Alex Smith - [2] CBG Collections Unit - [2] Rowan Barrett - [2]
CBG Collections Unit - [2] CBG Project Management Team - [7] Paul D.N. Hebert - [1]
BIN COMPLIANT WITH METADATA REQUIREMENTS
Specimen Images:
TDWGB826-10 {Agelenopsis pennsylvanica}
License:
CreativeCommons Attribution (2010)
License Holder:
CBG Photography Group, Centre for Biodiversity Genomics
Smithsonian Institution, National Museum of Natural History - [1]
University of Guelph - [2]
Sequencing Centers:
Centre for Biodiversity Genomics - [206]
Photography:
CBG Photography Group - [2] Chris C.Y. Ho - [1] G. Blagoev - [8] Jay Cossey - [3] John Reaume - [16] Megan Swan - [3] Stephanie Kirk - [3]
Collectors:
A.Borisenko - [1] A.V.Borisenko - [1] A.Voronkov - [2] Alex Smith - [10] Arachnid Team - [7] BIO Collections - [11] BIO Collections Staff - [11] BIObus 2009 - [6] BIObus 2010 - [2] BIObus 2013 - [7] BIObus 2014 - [2] BIObus: A.Borisenko - [3] Becky Nichols - [1] Bernard Martin - [1] Biobus 2011 - [6] C. Earley - [4] C. Johnstone - [2] C.Sobel - [2] C.Vandermeer - [2] CBG Collections - [1] CBG Collections Staff - [19] CSC - [1] Chris Johnstone - [3] Chris Roth - [3] Claire Gulliver - [1] David Brown - [1] E.Zakharov - [1] Ed Stewart - [3] Elizabeth Biro - [1] Erin McMillan - [1] G. Blagoev - [27] G. Meredith - [3] G.A.Blagoev - [16] Gergin Blagoev - [15] J. Cossey - [1] J. Howard - [2] J. Lin - [3] J. Malison - [1] J. Reaume - [2] J. Weinstein - [1] J.K. Reaume - [5] J.Smith - [1] James Sones - [2] Jeff Howard - [2] Jeremy deWaard - [5] Joanne Arcand - [1] Joanne Glavic - [3] Josh Palumbo - [6] Julie McColl - [1] K.Greenham - [2] K.Kerr - [1] Karin Davidson-Taylor - [1] Keenan Novak - [1] Kim Oppertshauser - [2] Kristina J. Anderson - [1] L.Attard - [2] M Donovan - [1] M. Mcphee - [2] M. Roblin - [1] M.A. Smith - [1] M.Brown - [1] M.Cain - [1] M.Milton - [1] M.Roblin - [1] MA Smith - [1] Nick Mundy - [1] Nicole Anthony - [1] Parks Canada Staff - [10] Paul Ayles - [1] Prabir Roy - [1] R.Labbee - [1] RBG staff - [1] RG Bennett - [1] Rob Higgins - [1] S. Espinola - [2] S. Miller - [1] S.Miller - [1] S.Ratnasingham - [1] Steve Pronovost - [1] Susan Muir - [1] T. Mason - [26] T. Schmitt - [2] T.F.Mitterboeck - [2] Tammy LeGros - [1] Tiffany Yau - [1] Tom Mason - [1] Tomislav Terzin - [4] Tyler Schaefer - [2] Tyler Zemlak - [9] V.Junea - [2] V.Levesque-Beaudin - [1]
Specimen Identification:
Alex Smith - [1] BOLD Identification System [2017] - [1] BOLD Identification System [2019] - [1] BOLD Identification System [2022] - [1] Bold Sequence Classifier - [1] Dana M De roche - [1] Donald J. Buckle - [1] Gergin A. Blagoev - [218] Paul D.N. Hebert - [9]