The Public Data Portal supports queries based on taxonomy(scientific names only), geography, attribution fields (i.e. collectors and taxonomists), specimen depositories, project or dataset codes, specimen and sequence identifiers (sampleids, museumids, processed, etc). Free text searches are allowed, the system will try to extract meaningful terms from the search. Search terms should be separated by a space, search terms containing more than one word ("United States" or "Mus musculus") should be wrapped in quotes.
Search examples (Searches are case insensitive):
Culicidae: will return all the mosquitoes in the database
Mammalia Aves: will return all the mammals and birds in the database. Using two terms under the same context (taxonomic in this case), returns all records that match either term.
Aves Peru: will return all the birds collected in Peru. Using two terms under a different context (taxonomic and geographic), returns records that only match both terms.
Hawaii -Chordata: will return all non-chordates, or invertebrates, collected in Hawaii. It is often necessary to exclude records based on a search criteria and is accomplished by adding a minus sign immediately in front of the search term.
"Biodiversity Institute of Ontario" Lepidoptera Florida: will return all moths and butterflies in the Biodiversity Institute of Ontario collection that were collected in Florida. Complex queries are possible by combining multiple search terms.
Search Guidelines:
No spaces in terms when using a multiterm seach (correct: "United States" Mammalia)
Negative symbol (-) is an exclusion operator which must be preceded by a space
If the same term appears in multiple contexts (i.e. "Florida" appears in both the geography list and in "University of Florida"). When using a free text search for the state Florida, employ the context clarification '[geo]' (eg Florida[geo]). Other context clarification tags are [tax], [ids], [inst], [researcher].
Paul D. N. Hebert , Sujeevan Ratnasingham , Evgeny V. Zakharov , Angela C. Telfer , Valerie Levesque-Beaudin , Megan A. Milton , Stephanie Pedersen , Paul Jannetta and Jeremy R. deWaard Counting animal species with DNA barcodes: Canadian insects Philosophical transactions of the royal society b 2016-09-05;371(1702):0-0 (PDF)
Jeremy R. deWaard, Valerie Levesque-Beaudin, Stephanie L. deWaard, Natalia V. Ivanova, Jaclyn T.A. McKeown, Renee Miskie, Suresh Naik, Kate H.J. Perez, Sujeevan Ratnasingham, Crystal N. Sobel, Jayme E. Sones, Claudia Steinke, Angela C. Telfer, Andrew D. Young, Monica R. Young, Evgeny V. Zakharov, and Paul D.N. Hebert Expedited assessment of terrestrial arthropod diversity by coupling Malaise traps with DNA barcoding. Genome 2018-09-26 (PDF)
Angela C Telfer, Monica R Young, Jenna Quinn, Kate Perez, Crystal N Sobel, Jayme E Sones, Valerie Levesque-Beaudin, Rachael Derbyshire, Jose Fernandez-Triana, Rodolphe Rougerie, Paul D N Hebert, Jeremy R deWaard and contributors. Biodiversity inventories in high gear: DNA barcoding facilitates a rapid biotic survey of a temperate nature reserve Biodiversity Data Journal 2015-08-30;3(e6313):1-176 (PDF)
Matthias F. Geiger, Jerome Moriniere, Axel Hausmann, Gerhard Haszprunar, Wolfgang Wägele, Paul D.N. Hebert & Björn Rulik Testing the Global Malaise Trap Program – How well does the current barcode reference library identify flying insects in Germany? Biodiversity Data Journal 2016-12-01;4(e10671):1-22 (PDF)
TREE RECONSTRUCTION OF BIN & NEAREST NEIGHBOR:
HAPLOTYPE NETWORK:
Color & Label Scheme:
COLLECTION LOCATION:
Countries:
Canada - [252]
United States - [49]
Serbia - [3]
France - [2]
Netherlands - [16]
Finland - [8]
Russia - [5]
Norway - [76]
United Kingdom - [25]
Germany - [48]
Japan - [3]
India - [4]
Belarus - [1]
Thailand - [1]
Sweden - [5]
Portugal - [3]
Georgia - [13]
Austria - [7]
Italy - [2]
Pakistan - [1]
Slovakia - [2]
Poland - [2]
China - [1]
Unrecoverable - [3]
DATA MANAGERS:
Public Data:
Private Data:
Marten Klinth - [3] CBG Collections Unit - [70] CBG Project Management Team - [143] Mat Seidensticker - [1] Nikolaus U Szucsich - [2] Jeffrey H Skevington - [53] Beverly Mcclenaghan - [1] Alex Smith - [5] Lifescanner Team - [1] Ben W Price - [1] Charles S Walker - [8] Claudia Copley - [1] Helge M Heimburg - [1] Mikko Pentinsaari - [9] Ladislav Roller - [1] Mindi Summers - [2] Dezene P.W. Huber - [1] Paolo Biella - [1] Mikhail V. Kozlov - [5] Sarah Adamowicz - [1] Gunilla Stahls - [4] Torbjorn Ekrem - [9] David Porco - [1] Sonia AF Ferreira - [1] Matt Bowser - [1] Bjoern Rulik - [5] Stefan Schmidt - [5] Cuong Q Tang - [3] Ximo Mengual - [12] Albert Phillimore - [8]
Zuzana Ciamporova Zatovicova - [1] Charles S Walker - [6] CBG Collections Unit - [50] Thor H Ringsby - [3] Paul D.N. Hebert - [10] CBG Project Management Team - [2] Colin Favret - [12] Bruno A S De medeiros - [1] Bjoern Rulik - [35] Dezene P.W. Huber - [1] Patricia L Jones - [1] Jeffrey H Skevington - [26] Andrea Chiocchio - [1] Sonia AF Ferreira - [1] Tomasz Rewicz - [2] Marko Mutanen - [3] Nikolaus U Szucsich - [1] Lyndall Pereira da Conceicoa - [6] Andrew Lucas - [4] Lars Hendrich - [4] Oscar Vorst - [10]
BIN COMPLIANT WITH METADATA REQUIREMENTS
Specimen Images:
FIDIP015-11 {Syrphus vitripennis}
License:
CreativeCommons Attribution NonCommercial No Derivatives (2011)
Canadian National Collection of Insects, Arachnids and Nematodes - [77]
Centre for Biodiversity Genomics - [241]
Field Museum of Natural History - [1]
Finnish Museum of Natural History, Zoological Museum - [4]
Kenai National Wildlife Refuge - [1]
Landesmuseum Kaernten - [1]
McGill University, Lyman Entomological Museum - [1]
Mined from GenBank, NCBI - [14]
NTNU University Museum, Department of Natural History - [59]
National Museum Wales - [4]
Natural History Museum, London - [4]
Naturalis Biodiversity Center - [10]
Naturhistorisches Museum Wien - [2]
Norwegian Institute for Nature Research - [1]
Research Center in Biodiversity and Genetic Resources - [2]
Royal British Columbia Museum - [1]
SNSB, Zoologische Staatssammlung Muenchen - [9]
Senckenberg Natural History Collections Dresden, Museum of Zoology - [1]
Slovak Academy of Sciences, Plant Science and Biodiversity Centre - [1]
Slovak National Museum, Natural History Museum - [1]
Station Linne - [3]
Tiroler Landesmuseum Ferdinandeum - [1]
Universite de Montreal, Institut de Recherche en Biologie Vegetale, Ouellet-Robert Entomological Collection - [12]
University of Calgary - [2]
University of Edinburgh - [8]
University of Guelph - [4]
University of Lodz, Department of Invertebrate Zoology and Hydrobiology - [2]
University of Manitoba, Wallis Roughley Museum of Entomology - [1]
University of Milano Bicocca - [1]
University of Oulu - [8]
University of Rouen, ECODIV Laboratory - [1]
University of Tuscia, Department of Ecological and Biological Sciences - [1]
Wellcome Sanger Institute - [6]
Zoologisches Forschungsmuseum Alexander Koenig - [53]
Sequencing Centers:
Beijing Genomics Institute - [32] Canadian Centre for DNA Barcoding - [2] Centre for Biodiversity Genomics - [228] Macrogen, Europe - [2] Microsynth AG - [1] Naturalis Biodiversity Center - [10] SNSB, Zoologische Staatssammlung Muenchen - [4] Swansea University - [4] University of Calgary - [2] University of Montreal - [3]
Photography:
A Lucas - [8] Anna Lempiainen - [2] Arnstein Staverlokk - [1] CBG Photography Group - [26] CBG Robotic Imager - [15] CBG Robotic Rig - [113] Chad Whitmell - [13] Diego Souza - [2] Emily Noel - [1] Hannah SALIM - [1] Jaclyn McCormick - [4] Jamie Weir, Becky Dubowitz - [8] Jeffrey H. Skevington - [9] Jinjing Wang - [4] Kati Tran - [2] Kellyn Hawley - [1] Kristen Mancuso - [1] L. Timaeus - [2] Libby Avis - [2] Marek Semelbauer - [1] Marjo Heikkinen - [3] Nadia Boukina - [5] Naturalis DNA barcoding facility - [3] Piia Partanen - [8] Rene Chabot - [2] Rick Turner - [2] S. Clout, C.I. Garrido Cortes, E.K. Richard, N.M. Welch - [4] Sanger BIOSCAN Team - [4] Schoder - [2] Sondre Dahle - [3] Spencer Walker - [1] Wiesmair - [1]
Collectors:
A Lucas - [4] A. - [3] A. Baker - [1] A. Eriksen - [6] A. Laugsand - [21] A.Barendregt - [3] A.Borisenko - [1] A.M. Skillestad Helmersen - [1] A.W. and A.M. Skevington - [1] ABP - [8] AJS - [8] AK - [8] Abida Nasreen - [1] Aija White - [1] Aijaz A. Wachkoo leg. - [3] Alex Smith - [1] Anne Parkhill - [1] Antti Haarto - [3] Arctic & Boreal Entomology - [8] Ashleigh Whiffin - [1] Astrin - [2] Austin; Laine - [1] Axel Hausman - [1] B. Kostiuk - [9] B. Maples - [6] B. McClenaghan - [1] B.Harding - [1] B.Titaro - [2] BIO Collections Staff - [8] BIO Team - [3] BIOBus 2012 - [5] BIObus 2008 - [2] BIObus 2009 - [2] BIObus 2010 - [2] BIObus 2013 - [2] Baker - [1] Barb Maschke - [1] Barry Yates - [1] Becky Nichols - [4] Benjamin - [1] Benjamin Maples - [1] Benjamin; Schattanek-Wiesmair - [1] Biobus 2010 - [1] Bowser - [1] Brandt - [1] Brenden Bertrand - [1] Bruce A. Bennett - [2] C. Vincent - [1] C.C. Grinter - [3] C.Kassebeer - [1] C.S. Guppy - [1] C.Shrimpton - [7] C.Wong - [1] CBG Collections Staff - [11] CBH staff - [3] CSC - [2] Carla Palangio - [1] Cavan Harpur - [1] Cheryl Angst - [1] Chiara Martino - [1] Chris Doerr - [1] Chris Roth - [1] Chris Silzer - [1] Chris Warren - [1] Christina Boser - [1] Christine Gubesch - [1] Cyndi Smith - [1] D. - [7] D. & Ssymank - [2] D. Montelongo - [3] D.Erasmus - [7] D.Faser - [1] D.Huber - [7] DAP - [8] DW - [8] Deborah Beaumont - [1] Dick Belgers - [2] Doczkal - [9] Dr. Ahktar Rasool - [1] E. Mannella - [1] E. Stur - [5] Emma Whiting - [2] Erin George-Samuel - [4] Ethel Aberg - [1] Eugenio Potito - [1] F. Lazarus - [9] F. Odegaard - [1] F. Odegaard & O. Hanssen - [2] F.Lui - [3] F.Tremblay - [8] Frode Odegaard - [1] GBOL-Team SNSD - [1] GBOL-Team ZFMK - [34] GGBC members et al. - [7] Gerald Skillen - [1] Giar-Ann - [2] Gill - [2] Giuseppe Martino - [1] H.Penney - [5] Hannah salim - [1] Heather Cole - [1] Heidi Andersen - [2] Heidi Brown - [1] Heidi Paterson - [1] I. Herfindal - [7] Ilia University & ZFMK - [1] Ingo Wendt - [1] Ingrid DeKlerk - [1] J Skevington - [1] J Skevington & JM Cummings - [1] J Wang - [4] J. - [9] J. Cossey - [1] J. Gibson - [1] J. Jones - [1] J. Laine - [1] J. Mailoux - [2] J. Skevington - [5] J.Baxter - [1] J.Cossey - [1] J.E. O`Hara - [2] J.G. Betz - [3] J.H. - [1] J.H. Skevington - [11] J.Klymko - [1] J.Sibbald - [1] JB - [8] JMS - [8] Jere Kahanpaeae - [1] Jeroen van Steenis - [2] Jesse - [1] Jessica Asp - [1] Joanne Glavic - [1] Jorgen Naalisvaara - [1] Josh Palumbo - [1] Julian Small - [1] K. McCabe - [11] K. Moran - [12] K.Greenham - [1] K.Perez - [1] KK - [8] KM - [8] Kara Layton - [1] Kevin Challoner - [1] Kevin Klassen - [1] Kim Oppertshauser - [1] Kinga Komur - [1] Korneyev - [3] Kristen McGuire - [2] Kung - [2] Kunz G. - [1] L. Avis - [4] L. Fraysse - [3] L. Janke - [11] L. Ramsay - [1] L.Attard - [1] L.E.Roscoe - [7] L.Gardiner - [3] L.Johanson - [1] LACM - [2] Lars-Olof Grund - [1] Leg. X. Mengual - [1] Lira Valencia - [2] Lorin - [1] M A Hannan - [1] M. Cesanek - [1] M. Freed - [1] M. Jackson - [1] M. Piepenbrink - [3] M. Seal - [1] M. Summers - [1] M.B.Lynch - [1] M.Blyth - [1] M.M. Locke - [2] M.Otway - [2] MA Smith - [4] MS - [8] Mackenzie Howse - [1] Malek Kalboussi - [1] Marion England - [1] Mat Seidensticker - [1] Meaghan Vavrek - [1] Medo Toure - [4] Meganne Harrison - [1] Melanie Cotelesage - [1] Melanie Nicholls - [1] Mengual - [2] Michael Graham - [1] Michelle Gibbs - [1] Mikhail Kozlov - [5] Monika Mysliwy - [1] Mr. Numan - [1] N.Perry - [1] NBP field party - [1] NHMLAC - [2] Nancy McEvoy - [2] Nicole Labine - [1] Nikolaus - [1] P.M. Catling - [9] Paige Fortier - [1] Pam Ryznar - [1] Paolo Biella - [1] Paul Harris - [1] Pedro Brito Lopes - [1] Peter Tarleton - [3] Petra - [1] Philip Hebert - [3] R. Avis - [4] R. Popko - [6] Reimann - [1] Rianna Badesha - [2] Ron Nelsons - [1] Rory O`Connor - [1] Rui Andrade - [1] Rulik et al - [4] S. & Voith - [5] S. Behrens - [6] S. Cannings - [1] S. Dahle - [19] S. Kelso - [1] S. Korneyev - [6] S.McCubbin - [1] S.Miller - [2] S.Monckton - [2] S.Robinson - [1] Sander Bot - [1] Schattanek-Wiesmair - [1] Schmidt - [5] Severyn - [2] Severyn Korneyev - [1] Severyn; Maples - [1] Stephanie Church - [6] Stephanie Hill - [1] Szucsich - [1] T. Ekrem - [5] T.H. Ringsby and B.-E. Saether - [3] Tatsiana Lipinksaya - [1] Taylor - [2] Thomas Zechmeister - [3] Timaeus - [1] Todd Smith - [1] V.Leveille - [1] Vitali Zverev - [5] Vladimir Blagoderov - [1] W. van Steenis - [1] Wanda Paslawski - [2] Weary - [1] Wouter van Steenis - [6] X. - [2] Y. Areeluck - [1]
Specimen Identification:
A. Barendregt - [3] Aija F White - [1] Alex Smith - [4] Andre Reimann - [13] Andrew D. Young - [2] Andrew Lucas - [4] Andrew Young - [3] Anna Maria Solecki - [1] Antti Haarto - [3] Axel Ssymank - [4] B. Harding - [1] BOLD Identification System [2017] - [1] BOLD Identification System [2019] - [4] BOLD Identification System [2020] - [3] BOLD Identification System [2022] - [3] BOLD Identification System [2023] - [50] BOLD Identification System [] - [4] BOLD Machine Learning Tool Kit - [3] Bjoern Rulik - [2] Bold - [3] Christian F. Kassebeer - [1] Dick Belgers - [2] Dieter Doczkal - [9] Emily S. Mannella - [1] Frode Odegaard - [1] G. Miranda - [1] Hans-Georg Rudzinski - [2] Heather Penney - [4] Helge M Heimburg - [1] Ivan Wright - [1] Jeffrey H Skevington - [35] Jere Kahanpaa - [1] Jeremy deWaard - [22] John T. Smit - [3] Juergen Kappert - [2] Julian Small - [1] Klaus von der Dunk - [1] Lorin Timaeus - [1] Lucas E. Roscoe - [7] M. Semelbauer - [1] Mackenzie Howse - [1] Malek Kalboussi - [10] Marten Klinth - [3] Martin C. Harvey - [1] Megan A Stamp - [8] Meganne K Harrison - [1] Michelle Locke - [1] Mikhail V. Kozlov - [5] Nikolaus U Szucsich - [1] P. M. Brousseau - [3] Paolo Biella - [1] Paul D.N. Hebert - [9] Renee Miskie - [3] Roger K. A. Morris - [1] Rui Andrade - [1] Sander Bot - [1] Teresa Bonacci - [1] Tore R. Nielsen - [3] Valerie Levesque-Beaudin - [149] W. Van Steenis - [1] Wouter Van Steenis - [5] Ximo Mengual - [20]